RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TUFMP49411 452 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ATP1A2P50993 1020 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 EPHB3P54753 998 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 MAP3K7CLP57077 242 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SH3BP2P78314 561 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 GPC5P78333 572 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SMARCB1Q12824 385 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 TDGQ13569 410 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 KCNJ12Q14500 433 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 IQCB1Q15051 598 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ZNF77Q15935 545 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 STX1AQ16623 288 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 MAN2A1Q16706 1144 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 GOLGA7BQ2TAP0 167 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 GAB4Q2WGN9 574 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ANO6Q4KMQ2 910 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 TCP11X2Q5H9J9 407 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ARHGAP17Q68EM7 881 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 IQCEQ6IPM2 695 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 VSTM1Q6UX27 236 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 C4orf50Q6ZRC1 276 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SCD5Q86SK9 330 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 AOPEPQ8N6M6 819 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 TMEM105Q8N8V8 129 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 RBBP8NLQ8NC74 664 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 NDRG1Q92597 394 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SMARCD2Q92925 531 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 JAKMIP2Q96AA8 810 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SMARCD1Q96GM5 515 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 PIWIL1Q96J94 861 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ZFYVE19Q96K21 471 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 NAA15Q9BXJ9 866 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 HPS4Q9NQG7 708 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 FANCLQ9NW38 375 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 MAGEC2Q9UBF1 373 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 MAGED2Q9UNF1 606 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SIK3Q9Y2K2 1263 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ASB3Q9Y575 518 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 FHOD1Q9Y613 1164 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SYCE3A1L190 88 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 HEPACAM2A8MVW5 462 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 MDM4O15151 490 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 GREM1O60565 184 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 CLSTN1O94985 981 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 GNA14O95837 355 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 SRFP11831 508 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 SOX9P48436 509 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 GCNT1Q02742 428 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TNK2Q07912 1038 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 SIGLEC14Q08ET2 396 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 FCHO2Q0JRZ9 810 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 MESP2Q0VG99 397 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 IFRD2Q12894 506 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TAF10Q12962 218 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 RAB41Q5JT25 222 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 E4F1Q66K89 784 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TRIM68Q6AZZ1 485 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 DENND1BQ6P3S1 775 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 ELMSAN1Q6PJG2 1045 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TXNDC11Q6PKC3 985 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 DENND5BQ6ZUT9 1274 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 ARID3BQ8IVW6 561 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 PPM1KQ8N3J5 372 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 LEMD2Q8NC56 503 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 SHC3Q92529 594 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 EZH1Q92800 747 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 HPS1Q92902 700 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 ELSPBP1Q96BH3 223 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 ACSF2Q96CM8 615 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 CYFIP2Q96F07 1278 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TMEM176AQ96HP8 235 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 FAXDC2Q96IV6 333 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 ZNF512Q96ME7 567 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 NT5C1BQ96P26 610 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 NT5C1AQ9BXI3 368 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 RNF38Q9H0F5 515 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TASP1Q9H6P5 420 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 CCSER2Q9H7U1 834 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 DMAP1Q9NPF5 467 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 SLC2A4RGQ9NR83 387 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 GDE1Q9NZC3 331 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 EGFL7Q9UHF1 273 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 TSPAN16Q9UKR8 245 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 CA14Q9ULX7 337 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 PCDHGA11Q9Y5H2 935 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 CACNA1HO95180 2353 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 FRYLO94915 3013 aa7.62□□□□□ -1.19
TOPBP1-207ENST00000509162 FAM170AA1A519 330 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 GTPBP10A4D1E9 387 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 LGALS16A8MUM7 142 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ESPNB1AK53 854 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 PI15O43692 258 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 STX10O60499 249 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CSH1P0DML2 217 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms