RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 CACHD1Q5VU97 1274 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 C9orf47Q6ZRZ4 202 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC01088-204ENST00000507761 ARFGAP1Q8N6T3 406 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 PPP1R35Q8TAP8 253 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 SPSB4Q96A44 273 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 LYZL4Q96KX0 146 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 AIFM3Q96NN9 605 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 DNMT3BQ9UBC3 853 aaKnown RBP4.43□□□□□ -1.7
LINC01088-204ENST00000507761 HS3ST3B1Q9Y662 390 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 SQORQ9Y6N5 450 aa4.43□□□□□ -1.7
LINC01088-204ENST00000507761 FAM90A8PA6NJQ4 464 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 CD3EAPO15446 510 aaKnown RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 MARCH6O60337 910 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 CRYABP02511 175 aaKnown RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 FAM90A13PP0C7W8 464 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 FAM90A24PP0C7X0 464 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 PSG1P11464 419 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 AGFG1P52594 562 aaKnown RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 CC2D1BQ5T0F9 858 aaKnown RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 B3GNT9Q6UX72 402 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 ZDHHC24Q6UX98 284 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 NGDNQ8NEJ9 315 aaKnown RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 ZNF548Q8NEK5 533 aaPredicted RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 SLC35G2Q8TBE7 412 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 SUCLG2Q96I99 432 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 ZFYVE19Q96K21 471 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 ACO2Q99798 780 aaKnown RBP4.42□□□□□ -1.7
LINC01088-204ENST00000507761 TRMOQ9BU70 441 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 RHOBTB2Q9BYZ6 727 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 BRINP2Q9C0B6 783 aa4.42□□□□□ -1.7
LINC01088-204ENST00000507761 LOC102723971A0A1B0GUV8 181 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 E2F8A0AVK6 867 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 PRR23D1E9PI22 279 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-204ENST00000507761 CLIC1O00299 241 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 CCP110O43303 1012 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 TULP3O75386 442 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 TOMM40O96008 361 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 PRR23D2P0DMB1 279 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-204ENST00000507761 SLC7A1P30825 629 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 HSF1Q00613 529 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 PIN1Q13526 163 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-204ENST00000507761 SLC9C1Q4G0N8 1177 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 KCTD20Q7Z5Y7 419 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 UBE2Q1Q7Z7E8 422 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 CHPFQ8IZ52 775 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 OR56A3Q8NH54 315 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 IL31RAQ8NI17 732 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 MAML1Q92585 1016 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 WDYHV1Q96HA8 205 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 ZBTB45Q96K62 511 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-204ENST00000507761 LRGUKQ96M69 825 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 TAAR9Q96RI9 348 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 ATP6V0A4Q9HBG4 840 aa4.41□□□□□ -1.7
LINC01088-204ENST00000507761 MBD3L4A6NDZ8 208 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 MBD3L3A6NE82 208 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 EXOC5O00471 708 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 RRP9O43818 475 aaKnown RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 ALDH1L1O75891 902 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 TACR3P29371 465 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 PTDSS1P48651 473 aaKnown RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 HTR6P50406 440 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 GATMP50440 423 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 SEMA3AQ14563 771 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 MFSD13AQ14CX5 517 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 PTPROQ16827 1216 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 NPNTQ6UXI9 565 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 COLCA1Q6ZS62 124 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 MICU3Q86XE3 530 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 C12orf76Q8N812 135 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 ACRBPQ8NEB7 543 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 JPH3Q8WXH2 748 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 NKX1-2Q9UD57 310 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-204ENST00000507761 ZNF180Q9UJW8 692 aa4.4□□□□□ -1.71
LINC01088-204ENST00000507761 A8MVJ9 347 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 B4DGG1 531 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 H7C4K7 107 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 PYCARD-AS1I3L0S3 204 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 TBX3O15119 743 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 TUSC2O75896 110 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 RASSF9O75901 435 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 HGFP14210 728 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 CD19P15391 556 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 IBSPP21815 317 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-204ENST00000507761 KLRC1P26715 233 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 PGDP52209 483 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 YPEL5P62699 121 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 SLC14A1Q13336 389 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 ERV3-1Q14264 604 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 NPY5RQ15761 445 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 ZNF750Q32MQ0 723 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 LVRNQ6Q4G3 990 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 MAEAQ7L5Y9 396 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 COL23A1Q86Y22 540 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-204ENST00000507761 ZBTB34Q8NCN2 500 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 SMRP1Q8NCR6 262 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms