RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PGBD1Q96JS3 809 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 GPR20Q99678 358 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ZNF341Q9BYN7 854 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
HERC4-213ENST00000506515 DKK3Q9UBP4 350 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 VPS51Q9UID3 782 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 DRG1Q9Y295 367 aaKnown RBP6.91□□□□□ -1.3
HERC4-213ENST00000506515 DTNAQ9Y4J8 743 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 TSPOAP1O95153 1857 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ADGRL1O94910 1474 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 VWC2LB2RUY7 222 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 SLC16A3O15427 465 aaKnown RBP6.9□□□□□ -1.3
HERC4-213ENST00000506515 ZSCAN9O15535 394 aaPredicted RBP6.9□□□□□ -1.3
HERC4-213ENST00000506515 PROM1O43490 865 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 PEX1O43933 1283 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 VIPP01282 170 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 FESP07332 822 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 NPPBP16860 134 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 SLC5A2P31639 672 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 TIAL1Q01085 375 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERC4-213ENST00000506515 PTPAQ15257 358 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 TREML2Q5T2D2 321 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 CAND1Q86VP6 1230 aaKnown RBP6.9□□□□□ -1.3
HERC4-213ENST00000506515 CPXCR1Q8N123 301 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 FSTL5Q8N475 847 aaPredicted RBP6.9□□□□□ -1.3
HERC4-213ENST00000506515 SLC44A3Q8N4M1 653 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 ABHD5Q8WTS1 349 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 XAGE5Q8WWM1 108 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 VN1R3Q9BXE9 311 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 ZCWPW1Q9H0M4 648 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 TMEM8AQ9HCN3 771 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 KLC4Q9NSK0 619 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 ADGRA2Q96PE1 1338 aa6.9□□□□□ -1.3
HERC4-213ENST00000506515 TNIKQ9UKE5 1360 aa6.9□□□□□ -1.31
HERC4-213ENST00000506515 GLI2P10070 1586 aa6.9□□□□□ -1.31
HERC4-213ENST00000506515 FCHO1O14526 889 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 ITGA5P08648 1049 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 RBL1P28749 1068 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 ZEB1P37275 1124 aaPredicted RBP6.89□□□□□ -1.31
HERC4-213ENST00000506515 LIPAP38571 399 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 RENBPP51606 427 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 ATP1A4Q13733 1029 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 PRKG1Q13976 671 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 TIGD6Q17RP2 521 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 ZNF354CQ86Y25 554 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 MBD3L2Q8NHZ7 208 aaPredicted RBP6.89□□□□□ -1.31
HERC4-213ENST00000506515 TRAPPC12Q8WVT3 735 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 PPM1EQ8WY54 764 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 TFAP2BQ92481 460 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 ZDHHC12Q96GR4 267 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 HAPLN3Q96S86 360 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 KATNAL1Q9BW62 490 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 MMRN2Q9H8L6 949 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 RIMKLBQ9ULI2 386 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 CA14Q9ULX7 337 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 SLC27A6Q9Y2P4 619 aa6.89□□□□□ -1.31
HERC4-213ENST00000506515 C1QTNF3-AMACRE9PGA6 284 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 J3KTA2 159 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 EXOC5O00471 708 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 PCDH17O14917 1159 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 DNPH1O43598 174 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 GLP2RO95838 553 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 GYS1P13807 737 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 VEGFAP15692 232 aaPredicted RBP6.88□□□□□ -1.31
HERC4-213ENST00000506515 ALDH18A1P54886 795 aaKnown RBP6.88□□□□□ -1.31
HERC4-213ENST00000506515 TIRAPP58753 221 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 BIRC3Q13489 604 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 FHL3Q13643 280 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 POSTNQ15063 836 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 TMEM95Q3KNT9 176 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 SULT6B1Q6IMI4 303 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 LIN54Q6MZP7 749 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 TBC1D20Q96BZ9 403 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 ALG8Q9BVK2 526 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 DPCDQ9BVM2 203 aaPredicted RBP6.88□□□□□ -1.31
HERC4-213ENST00000506515 TMEM120AQ9BXJ8 343 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 EHD3Q9NZN3 535 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 DGKBQ9Y6T7 804 aa6.88□□□□□ -1.31
HERC4-213ENST00000506515 ABCC2Q92887 1545 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 CCDC189A1A4V9 331 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 OR2W5A6NFC9 320 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 PSMD9O00233 223 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 NPHP1O15259 732 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 ITGA2BP08514 1039 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 IL6RP08887 468 aaPredicted RBP6.87□□□□□ -1.31
HERC4-213ENST00000506515 NR2F6P10588 404 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 FOLR3P41439 243 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 PDE1AP54750 535 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 FOXO1Q12778 655 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 PTPRRQ15256 657 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 HSP90AB4PQ58FF6 505 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 ZNF618Q5T7W0 954 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 JMJD6Q6NYC1 403 aaPredicted RBP6.87□□□□□ -1.31
HERC4-213ENST00000506515 KLHL17Q6TDP4 642 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 DPY19L3Q6ZPD9 716 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 SMAP1Q8IYB5 467 aaPredicted RBP6.87□□□□□ -1.31
HERC4-213ENST00000506515 METTL25Q8N6Q8 603 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 SUPT20HQ8NEM7 779 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms