RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 A0A1B0GVG6 124 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 MCF2LO15068 1137 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TM7SF2O76062 418 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 SORBS2O94875 1100 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 CSH1P0DML2 217 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 CSH2P0DML3 217 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 CD19P15391 556 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 ALDH18A1P54886 795 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 POLE2P56282 527 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TTC39BQ5VTQ0 682 aaPredicted RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 XRRA1Q6P2D8 792 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 C1orf228Q6PIY5 440 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 IZUMO2Q6UXV1 221 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 ATG14Q6ZNE5 492 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 FAF2Q96CS3 445 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 C7orf26Q96N11 449 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TUBGCP5Q96RT8 1024 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 MMP19Q99542 508 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 FRMD8P1Q9BZ68 369 aaPredicted RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 SDCBP2Q9H190 292 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 MAGEA13PA6NCF6 341 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ANKRD33BA6NCL7 494 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 MEI4A8MW99 385 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 PIK3R2O00459 728 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 MSCO60682 206 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 LYNP07948 512 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ACTR3P61158 418 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 NOMO1Q15155 1222 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 TRMT10BQ6PF06 316 aaKnown RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 FNIP1Q8TF40 1166 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 PIWIL1Q96J94 861 aaKnown RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 TTC1Q99614 292 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 PNPLA8Q9NP80 782 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 F8W8V4 182 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 HOXC6P09630 235 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 CPOXP36551 454 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ROR1Q01973 937 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 AP1ARQ63HQ0 302 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 CDR2LQ86X02 465 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 MFN1Q8IWA4 741 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 SMC1BQ8NDV3 1235 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 PCYT2Q99447 389 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 PARP14Q460N5 1801 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ADCY3O60266 1144 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 SNNO75324 88 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ENDOD1O94919 500 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 GSRP00390 522 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 IL4RP24394 825 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 OSTNP61366 133 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ANGEL2Q5VTE6 544 aaKnown RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 NET1Q7Z628 596 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 APLFQ8IW19 511 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 MPP5Q8N3R9 675 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 TTLL6Q8N841 843 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 CEP120Q8N960 986 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 PPFIBP2Q8ND30 876 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF778Q96MU6 729 aa12.36□□□□□ -0.43
UBE3D-206ENST00000505226 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-206ENST00000505226 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 A0A088AWK7 358 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 BUD23O43709 281 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 SNRPAP09012 282 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 PDE1BQ01064 536 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 DUOXA2Q1HG44 320 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 C15orf59Q2T9L4 293 aaPredicted RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 GSTCDQ8NEC7 633 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 SLC7A3Q8WY07 619 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF668Q96K58 619 aaPredicted RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 TMEM134Q9H6X4 195 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 PCMTD2Q9NV79 361 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ZC3H7BQ9UGR2 993 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 TAGLN3Q9UI15 199 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 RLFQ13129 1914 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 RNASEH1O60930 286 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 STIP1P31948 543 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ABCD1P33897 745 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 CCNFP41002 786 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 CDH6P55285 790 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 TMEM132BQ14DG7 1078 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms