RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LMO3Q8TAP4 145 aa14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 CCDC34Q96HJ3 373 aa14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 DUSP16Q9BY84 665 aa14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 IMPG2Q9BZV3 1241 aa14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 FAM124BQ9H5Z6 455 aaPredicted RBP14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 PARD6AQ9NPB6 346 aa14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 CISHQ9NSE2 258 aa14.79□□□□□ -0.04
PDLIM7-211ENST00000504318 SDK1Q7Z5N4 2213 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 CCDC163A0A0D9SF12 145 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 E2F8A0AVK6 867 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 TBX18O95935 607 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 ABL1P00519 1130 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 PPP2R5DQ14738 602 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 FBXO43Q4G163 708 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 RAB41Q5JT25 222 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 ARHGAP17Q68EM7 881 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 BHLHA9Q7RTU4 235 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 ETFBKMTQ8IXQ9 262 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 KIAA2013Q8IYS2 634 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 RMDN1Q96DB5 314 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 DHTKD1Q96HY7 919 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 KLF16Q9BXK1 252 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 FBXO44Q9H4M3 255 aa14.78□□□□□ -0.04
PDLIM7-211ENST00000504318 RALGAPA1Q6GYQ0 2036 aa14.77□□□□□ -0.04
PDLIM7-211ENST00000504318 GOLGA6L4A6NEF3 574 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 TLR5O60602 858 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 HNRNPLP14866 589 aaKnown RBP eCLIP14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 EIF2DP41214 584 aaKnown RBP14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 SLC6A11P48066 632 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 AMPD2Q01433 879 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 ZNF394Q53GI3 561 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 ISM2Q6H9L7 571 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 KLHDC10Q6PID8 442 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 SYT13Q7L8C5 426 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 CCDC186Q7Z3E2 898 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 TTC30AQ86WT1 665 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 DDX42Q86XP3 938 aaKnown RBP eCLIP14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 BBS7Q8IWZ6 715 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 ZNF276Q8N554 614 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 TTC16Q8NEE8 873 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 RPLP0P6Q8NHW5 317 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 USP33Q8TEY7 942 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 TMEM176AQ96HP8 235 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 CEP63Q96MT8 703 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 MED15Q96RN5 788 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 GTPBP4Q9BZE4 634 aaKnown RBP14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 HCN2Q9UL51 889 aa14.77□□□□□ -0.05
PDLIM7-211ENST00000504318 A0A1W2PQH9 124 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 HOXC11O43248 304 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 STX10O60499 249 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 CLSTN1O94985 981 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 ACO1P21399 889 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 CNR2P34972 360 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 KIR2DL1P43626 348 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 PXNP49023 591 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 FMO5P49326 533 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 CUL2Q13617 745 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 PKDCCQ504Y2 493 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 DCAF17Q5H9S7 520 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 LY6G5CQ5SRR4 150 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 HEATR6Q6AI08 1181 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 Q6ZNB5 142 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 HTR3DQ70Z44 454 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 OTUB2Q96DC9 234 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 TSG101Q99816 390 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 ZSWIM1Q9BR11 485 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 TLR8Q9NR97 1041 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 DLL3Q9NYJ7 618 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 ARMCX3Q9UH62 379 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 PLXND1Q9Y4D7 1925 aa14.76□□□□□ -0.05
PDLIM7-211ENST00000504318 TULP2O00295 520 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 SLC9A3R1O14745 358 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 MDM4O15151 490 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 GABBR2O75899 941 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 MARSP56192 900 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 NR1H3Q13133 447 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 LPAL2Q16609 132 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 LAIR1Q6GTX8 287 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 CAMKK1Q8N5S9 505 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 HHIPQ96QV1 700 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 UBXN6Q9BZV1 441 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 TBC1D14Q9P2M4 693 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 EBF1Q9UH73 591 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 ABCA7Q8IZY2 2146 aa14.75□□□□□ -0.05
PDLIM7-211ENST00000504318 PSMA7O14818 248 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 ATG13O75143 517 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 ADH5P11766 374 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 ID4P47928 161 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 SIM2Q14190 667 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 DMC1Q14565 340 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 TCERG1LQ5VWI1 586 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 PM20D1Q6GTS8 502 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 PIGZQ86VD9 579 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 RASSF3Q86WH2 238 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 TMEM25Q86YD3 366 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 ANKRD52Q8NB46 1076 aa14.74□□□□□ -0.05
PDLIM7-211ENST00000504318 GAB3Q8WWW8 586 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms