RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CD48P09326 243 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 VCPP55072 806 aaKnown RBP22.99■■□□□ 1.27
PTPN13-205ENST00000502971 CDH6P55285 790 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 RAB6CQ53S08 254 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 SLC39A5Q6ZMH5 540 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 STRADAQ7RTN6 431 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 ZNF280BQ86YH2 543 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 RFX6Q8HWS3 928 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 BBOF1Q8ND07 529 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 MYLPFQ96A32 169 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 SNF8Q96H20 258 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 FAM193BQ96PV7 902 aaPredicted RBP22.99■■□□□ 1.27
PTPN13-205ENST00000502971 FAM118BQ9BPY3 351 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 MAK16Q9BXY0 300 aaKnown RBP22.99■■□□□ 1.27
PTPN13-205ENST00000502971 RAB6CQ9H0N0 254 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 CSNK1G1Q9HCP0 422 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 PCDHB7Q9Y5E2 793 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 ITGB1P05556 798 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 ITGAVP06756 1048 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 TKTL1P51854 596 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 YWHAZP63104 245 aaKnown RBP22.98■■□□□ 1.27
PTPN13-205ENST00000502971 RNASELQ05823 741 aaKnown RBP22.98■■□□□ 1.27
PTPN13-205ENST00000502971 DHX9Q08211 1270 aaKnown RBP22.98■■□□□ 1.27
PTPN13-205ENST00000502971 RAB41Q5JT25 222 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 COL13A1Q5TAT6 717 aaPredicted RBP22.98■■□□□ 1.27
PTPN13-205ENST00000502971 ANKRD33Q7Z3H0 272 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 PIK3R5Q8WYR1 880 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 TOX2Q96NM4 488 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 ZIM3Q96PE6 472 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 PKMYT1Q99640 499 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 CALN1Q9BXU9 219 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 TXLNGYQ9BZA5 131 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 ZNF148Q9UQR1 794 aa22.98■■□□□ 1.27
PTPN13-205ENST00000502971 PARNO95453 639 aaKnown RBP22.97■■□□□ 1.27
PTPN13-205ENST00000502971 ATF2P15336 505 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 HSD17B3P37058 310 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 FAM193AP78312 1265 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 CAV1Q03135 178 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 TFDP2Q14188 446 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 DPYSL3Q14195 570 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 KRT81Q14533 505 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 OASLQ15646 514 aaKnown RBP22.97■■□□□ 1.27
PTPN13-205ENST00000502971 SLC25A52Q3SY17 297 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 GSTA5Q7RTV2 222 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 DEFB106AQ8N104 65 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 ZMIZ2Q8NF64 920 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 SLC35B2Q8TB61 432 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 SH3GL2Q99962 352 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 CNGB3Q9NQW8 809 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 TANC1Q9C0D5 1861 aa22.97■■□□□ 1.27
PTPN13-205ENST00000502971 ZNF487B1APH4 448 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 APOC4-APOC2K7ER74 178 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 PQBP1O60828 265 aaKnown RBP22.96■■□□□ 1.27
PTPN13-205ENST00000502971 KRT14P02533 472 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 APOC2P02655 101 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 IVDP26440 423 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 NOS2P35228 1153 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 TSPY1Q01534 308 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 ERMARDQ5T6L9 678 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 LRIG3Q6UXM1 1119 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 ABI1Q8IZP0 508 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 ALLCQ8N6M5 410 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 FAM149B1Q96BN6 582 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 SLC2A13Q96QE2 648 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 SNRNP25Q9BV90 132 aaKnown RBP22.96■■□□□ 1.27
PTPN13-205ENST00000502971 TRAPPC3O43617 180 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 B4GALT3O60512 393 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 KLRC2P26717 231 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 ADCY8P40145 1251 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 DYNLT1P63172 113 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 OTUD4Q01804 1114 aaKnown RBP22.96■■□□□ 1.27
PTPN13-205ENST00000502971 YWHAHQ04917 246 aaPredicted RBP22.96■■□□□ 1.27
PTPN13-205ENST00000502971 GOLGA6L1Q8N7Z2 621 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 OR10T2Q8NGX3 314 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 ACTL9Q8TC94 416 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 KCNK16Q96T55 309 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 POPDC2Q9HBU9 364 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 STAP1Q9ULZ2 295 aa22.96■■□□□ 1.27
PTPN13-205ENST00000502971 HHLA1C9JL84 531 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 TFE3P19532 575 aaPredicted RBP22.95■■□□□ 1.26
PTPN13-205ENST00000502971 OR1G1P47890 313 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 NDUFV1P49821 464 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 DAOAP59103 153 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 UAP1Q16222 522 aaPredicted RBP22.95■■□□□ 1.26
PTPN13-205ENST00000502971 NT5C3BQ969T7 300 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 HAUS1Q96CS2 278 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 RNF157Q96PX1 679 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 ULBP1Q9BZM6 244 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 TSPYL1Q9H0U9 437 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 C11orf49Q9H6J7 331 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 PCDH18Q9HCL0 1135 aa22.95■■□□□ 1.26
PTPN13-205ENST00000502971 KIAA0100Q14667 2235 aaKnown RBP22.95■■□□□ 1.26
PTPN13-205ENST00000502971 F8W810 466 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 POLR3GO15318 223 aaPredicted RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 HOXA2O43364 376 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 SULT1E1P49888 294 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 CACNA2D1P54289 1103 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 SLMAPQ14BN4 828 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 TRIP13Q15645 432 aaPredicted RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 UBLCP1Q8WVY7 318 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms