RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 CSNK1G1Q9HCP0 422 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 DMAP1Q9NPF5 467 aaPredicted RBP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 MARCH5Q9NX47 278 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 MATKP42679 507 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 CDH6P55285 790 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 KRT17Q04695 432 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 PPP1R7Q15435 360 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 MAPRE1Q15691 268 aaKnown RBP18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 SLC39A12Q504Y0 691 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 DCAF6Q58WW2 860 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 HFE2Q6ZVN8 426 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 CEP57Q86XR8 500 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 DDX23Q9BUQ8 820 aaKnown RBP18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 MRPL9Q9BYD2 267 aaKnown RBP18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM114A2Q9NRY5 505 aa18.6■□□□□ 0.57
CHRNA4-206ENST00000498043 NT5C1B-RDH14C9J2C7 533 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 USP17L7P0C7H9 530 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 SULT1E1P49888 294 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 DAOAP59103 153 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 YWHAZP63104 245 aaKnown RBP18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 MMRN1Q13201 1228 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 CCNG2Q16589 344 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 ZC3H12AQ5D1E8 599 aaKnown RBP18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 RAB41Q5JT25 222 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 VARS2Q5ST30 1063 aaKnown RBP18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM171A1Q5VUB5 890 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 SPATA2LQ8IUW3 424 aaPredicted RBP18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 CAVIN3Q969G5 261 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 SNRNP25Q9BV90 132 aaKnown RBP18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 HOMER3Q9NSC5 361 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 CALCOCO1Q9P1Z2 691 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 SNX24Q9Y343 169 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 YJEFN3A6XGL0 299 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 E7ENQ6 273 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 FBXO21O94952 628 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 PITX1P78337 314 aaPredicted RBP18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 KRT81Q14533 505 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 RFX6Q8HWS3 928 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 LRRC43Q8N309 656 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 SLCO2A1Q92959 643 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 GPR62Q9BZJ7 368 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 CNGB3Q9NQW8 809 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 FAN1Q9Y2M0 1017 aa18.59■□□□□ 0.57
CHRNA4-206ENST00000498043 SYNJ2BP-COX16A0A087WUM0 186 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 LIASO43766 372 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 CST8O60676 142 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 OAZ2O95190 189 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 RPL21P46778 160 aaKnown RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 IKBKEQ14164 716 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 TAZQ16635 292 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 CA9Q16790 459 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 OTUD1Q5VV17 481 aaPredicted RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 CNKSR3Q6P9H4 555 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 C4orf50Q6ZRC1 276 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 TMEM173Q86WV6 379 aaPredicted RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 EIF1ADQ8N9N8 165 aaKnown RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 ANKLE1Q8NAG6 615 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 GRK7Q8WTQ7 553 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 CENPIQ92674 756 aaPredicted RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 VWCEQ96DN2 955 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 COLEC11Q9BWP8 271 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 POPDC2Q9HBU9 364 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 PRDM5Q9NQX1 630 aaPredicted RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 ABI2Q9NYB9 513 aaPredicted RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 COX16Q9P0S2 106 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 SAE1Q9UBE0 346 aaPredicted RBP18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 DNPEPQ9ULA0 475 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 HPCAL4Q9UM19 191 aa18.58■□□□□ 0.57
CHRNA4-206ENST00000498043 SF3B1O75533 1304 aaKnown RBP eCLIP18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 SYN3O14994 580 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 GAS8O95995 478 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 ALDH2P05091 517 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 CYP2F1P24903 491 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 DPYSL3Q14195 570 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 TRIP13Q15645 432 aaPredicted RBP18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 SLC25A52Q3SY17 297 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 SYPL2Q5VXT5 272 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 FAM43BQ6ZT52 329 aaPredicted RBP18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 TEKT4Q8WW24 435 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 SLC2A13Q96QE2 648 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 ZCWPW1Q9H0M4 648 aa18.58■□□□□ 0.56
CHRNA4-206ENST00000498043 LTBP2Q14767 1821 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 ZBED1O96006 694 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 ARSEP51690 589 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 NNTQ13423 1086 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 BOLA3Q53S33 107 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 BBS12Q6ZW61 710 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 FAM131BQ86XD5 332 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 CCDC185Q8N715 623 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 TSEN2Q8NCE0 465 aaKnown RBP18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 ATL2Q8NHH9 583 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 FAM53CQ9NYF3 392 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 ASIC3Q9UHC3 531 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 NAALADL1Q9UQQ1 740 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 EFR3BQ9Y2G0 817 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 MYO16Q9Y6X6 1858 aa18.57■□□□□ 0.56
CHRNA4-206ENST00000498043 COL4A6Q14031 1691 aa18.56■□□□□ 0.56
CHRNA4-206ENST00000498043 MDM4O15151 490 aa18.56■□□□□ 0.56
CHRNA4-206ENST00000498043 GALTP07902 379 aa18.56■□□□□ 0.56
CHRNA4-206ENST00000498043 NOS2P35228 1153 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms