RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 RABL2AQ9UBK7 228 aaPredicted RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 A6NHS1 94 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 TREHO43280 583 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 SNX3O60493 162 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 UPP2O95045 317 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 ERBB2P04626 1255 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 KRT16P08779 473 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 RALAP11233 206 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 NQO1P15559 274 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 SCNN1AP37088 669 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 HDAC4P56524 1084 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 KRT72Q14CN4 511 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 NUGGCQ68CJ6 796 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 DCUN1D2Q6PH85 259 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 TMEM40Q8WWA1 233 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 LENG1Q96BZ8 264 aaPredicted RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 TMEM109Q9BVC6 243 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 TRIP11Q15643 1979 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 C3orf70A6NLC5 250 aaPredicted RBP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 EIF3FO00303 357 aaPredicted RBP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 RECQL4O94761 1208 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 AGTP01019 485 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 PFKMP08237 780 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 KRT3P12035 628 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 ITIH2P19823 946 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 IVDP26440 423 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 FCGRTP55899 365 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 LMNB2Q03252 620 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 PTK7Q13308 1070 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 ZNF560Q96MR9 790 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 PWWP2AQ96N64 755 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 MTRF1LQ9UGC7 380 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 TUBGCP4Q9UGJ1 667 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 DRG1Q9Y295 367 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 hCG_1818297A0A087WSY0 165 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 GAS8O95995 478 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 KRT7P08729 469 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 LRPAP1P30533 357 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 PCK1P35558 622 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 TRIP13Q15645 432 aaPredicted RBP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 PACS1Q6VY07 963 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 ARCQ7LC44 396 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 VSIG1Q86XK7 387 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 APLFQ8IW19 511 aaPredicted RBP12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 CCHCR1Q8TD31 782 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 KLHL29Q96CT2 875 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 CHST7Q9NS84 486 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 C15orf41Q9Y2V0 281 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 GMEB1Q9Y692 573 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 THSD7BQ9C0I4 1608 aa12.07□□□□□ -0.48
SNRNP200-208ENST00000497539 TMEM120BA0PK00 339 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 M0QYV0 167 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TP73O15350 636 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CREB3O43889 395 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TJP3O95049 919 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 GJB6O95452 261 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CDKN2BP42772 138 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 MRPS6P82932 125 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 KRT17Q04695 432 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 MPP2Q14168 576 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CYP4A22Q5TCH4 519 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ANKS1BQ7Z6G8 1248 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CROCCP2Q86T23 111 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ZDHHC17Q8IUH5 632 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 RELL1Q8IUW5 271 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CRYBG2Q8N1P7 616 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ARFGAP1Q8N6T3 406 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ARHGEF2Q92974 986 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 NKD2Q969F2 451 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 NACC2Q96BF6 587 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ZNF570Q96NI8 536 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 YIPF3Q9GZM5 350 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 DNAI2Q9GZS0 605 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 EBF2Q9HAK2 575 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CHST12Q9NRB3 414 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 SCN1AP35498 2009 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 F8VP50 259 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 NDC80O14777 642 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 KRT1P04264 644 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 GSTA1P08263 222 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 LINGO3P0C6S8 592 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 CST5P28325 142 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 RFC1P35251 1148 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ABL2P42684 1182 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 SNX16P57768 344 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms