RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 SNX25Q9H3E2 840 aa16.87■□□□□ 0.29
COL4A2-209ENST00000494852 DEC1Q9P2X7 70 aa16.87■□□□□ 0.29
COL4A2-209ENST00000494852 STARD13Q9Y3M8 1113 aa16.87■□□□□ 0.29
COL4A2-209ENST00000494852 PCDH15Q96QU1 1955 aa16.87■□□□□ 0.29
COL4A2-209ENST00000494852 MYOFQ9NZM1 2061 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 A0A1W2PQD8 194 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 ZNF217O75362 1048 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 SYPP08247 313 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 YWHAQP27348 245 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 CACNA2D1P54289 1103 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 WDR49Q8IV35 697 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 NUP93Q8N1F7 819 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 LINC00301Q8NCQ3 95 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
COL4A2-209ENST00000494852 MRPL45Q9BRJ2 306 aaKnown RBP16.86■□□□□ 0.29
COL4A2-209ENST00000494852 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 TMEM30AQ9NV96 361 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 CALCOCO1Q9P1Z2 691 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 NME7Q9Y5B8 376 aa16.86■□□□□ 0.29
COL4A2-209ENST00000494852 SMG1Q96Q15 3661 aaKnown RBP16.85■□□□□ 0.29
COL4A2-209ENST00000494852 IGHV1OR15-9A0A0B4J2B8 117 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 A0A1W2PQF6 199 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 COCHO43405 550 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 TULP3O75386 442 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 RTN3O95197 1032 aaPredicted RBP16.85■□□□□ 0.29
COL4A2-209ENST00000494852 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
COL4A2-209ENST00000494852 IDEP14735 1019 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 PTPN1P18031 435 aaKnown RBP16.85■□□□□ 0.29
COL4A2-209ENST00000494852 NTSR1P30989 418 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 TRAPPC11Q7Z392 1133 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 DEFB119Q8N690 84 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 NAT16Q8N8M0 369 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 TERB1Q8NA31 727 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 SPHK2Q9NRA0 654 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 PANK4Q9NVE7 773 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 HCN2Q9UL51 889 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 GPSM3Q9Y4H4 160 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 CEP192Q8TEP8 1941 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 ADAMTS9Q9P2N4 1935 aa16.85■□□□□ 0.29
COL4A2-209ENST00000494852 MYO18AQ92614 2054 aaKnown RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 ZBTB24O43167 697 aaPredicted RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 GJB3O75712 270 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 F13A1P00488 732 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 CST3P01034 146 aaPredicted RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 HOXB2P14652 356 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 TXLNAP40222 546 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 TUBP50607 506 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 STK38Q15208 465 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 TRIP6Q15654 476 aaKnown RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 C10orf76Q5T2E6 689 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 FOXD4L5Q5VV16 416 aaPredicted RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 CBWD2Q8IUF1 395 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 SLC41A1Q8IVJ1 513 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 OR6B3Q8NGW1 331 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 ADAMTS14Q8WXS8 1223 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 FOXD4L4Q8WXT5 416 aaPredicted RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 ZNF419Q96HQ0 510 aaPredicted RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 ZNF518BQ9C0D4 1074 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 FAM124BQ9H5Z6 455 aaPredicted RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 CD248Q9HCU0 757 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
COL4A2-209ENST00000494852 SH3BP1Q9Y3L3 701 aa16.84■□□□□ 0.29
COL4A2-209ENST00000494852 SPTLC2O15270 562 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 PPP6R2O75170 966 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 YEATS4O95619 227 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 SCAPQ12770 1279 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 IFRD2Q12894 506 aaPredicted RBP16.83■□□□□ 0.28
COL4A2-209ENST00000494852 PKP1Q13835 747 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 CCDC73Q6ZRK6 1079 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 TMEM25Q86YD3 366 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 MIB1Q86YT6 1006 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 BBS7Q8IWZ6 715 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 TRIML1Q8N9V2 468 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 B3GALNT2Q8NCR0 500 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 OR2I1PQ8NGU4 316 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 FBXO32Q969P5 355 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 B3GNT5Q9BYG0 378 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 DPEP3Q9H4B8 488 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 IL37Q9NZH6 218 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 HSPBP1Q9NZL4 362 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 SUSD2Q9UGT4 822 aa16.83■□□□□ 0.28
COL4A2-209ENST00000494852 CHORDC1Q9UHD1 332 aaPredicted RBP16.83■□□□□ 0.28
COL4A2-209ENST00000494852 SH3BP5O60239 455 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 STAU1O95793 577 aaKnown RBP16.82■□□□□ 0.28
COL4A2-209ENST00000494852 ANO4Q32M45 955 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 WDR72Q3MJ13 1102 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 SDE2Q6IQ49 451 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 STXBP4Q6ZWJ1 553 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
COL4A2-209ENST00000494852 HSPA12BQ96MM6 686 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 CAMK1GQ96NX5 476 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 GABRG3Q99928 467 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 COMMD8Q9NX08 183 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 PCDHB9Q9Y5E1 797 aa16.82■□□□□ 0.28
COL4A2-209ENST00000494852 ADAMTS20P59510 1910 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms