RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 SLITRK1Q96PX8 696 aa10.53□□□□□ -0.72
LINC00488-201ENST00000494582 DCUN1D5Q9BTE7 237 aa10.53□□□□□ -0.72
LINC00488-201ENST00000494582 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
LINC00488-201ENST00000494582 SLC13A1Q9BZW2 595 aa10.53□□□□□ -0.72
LINC00488-201ENST00000494582 HESX1Q9UBX0 185 aa10.53□□□□□ -0.72
LINC00488-201ENST00000494582 PLLPQ9Y342 182 aa10.53□□□□□ -0.72
LINC00488-201ENST00000494582 COL24A1Q17RW2 1714 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 TRIM49D1C9J1S8 452 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 MATN2O00339 956 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 COPEO14579 308 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 ATP2A1O14983 1001 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 UGT1A9O60656 530 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 ENTPD3O75355 529 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 CAPN15O75808 1086 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 C1QAP02745 245 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 ZNF23P17027 643 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 NT5C2P49902 561 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 MXI1P50539 228 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 KPNA1P52294 538 aaPredicted RBP10.52□□□□□ -0.72
LINC00488-201ENST00000494582 CDH15P55291 814 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 SNAP25P60880 206 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.72
LINC00488-201ENST00000494582 TBCCQ15814 346 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 TBC1D10BQ4KMP7 808 aaPredicted RBP10.52□□□□□ -0.72
LINC00488-201ENST00000494582 NANOGP8Q6NSW7 305 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 TMEM214Q6NUQ4 689 aaKnown RBP10.52□□□□□ -0.72
LINC00488-201ENST00000494582 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 PALM2Q8IXS6 379 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 DAW1Q8N136 415 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 TSPAN14Q8NG11 270 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 COPS7BQ9H9Q2 264 aaPredicted RBP10.52□□□□□ -0.72
LINC00488-201ENST00000494582 UGT1A7Q9HAW7 530 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 UGT1A10Q9HAW8 530 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 UGT1A8Q9HAW9 530 aa10.52□□□□□ -0.72
LINC00488-201ENST00000494582 TRNAU1APQ9NX07 287 aaKnown RBP10.52□□□□□ -0.72
LINC00488-201ENST00000494582 CXorf49A8MYA2 514 aaPredicted RBP10.52□□□□□ -0.73
LINC00488-201ENST00000494582 E7ESA3 106 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 CHMP2AO43633 222 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 LDHBP07195 334 aaKnown RBP10.52□□□□□ -0.73
LINC00488-201ENST00000494582 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 GABRB3P28472 473 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 DSG3P32926 999 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
LINC00488-201ENST00000494582 BMPR2Q13873 1038 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 ADGRE1Q14246 886 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 ZNF423Q2M1K9 1284 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 VWA5B1Q5TIE3 1220 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 CRLF3Q8IUI8 442 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 CENPSQ8N2Z9 138 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 CCDC33Q8N5R6 958 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 DHRS1Q96LJ7 313 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 HSD17B14Q9BPX1 270 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
LINC00488-201ENST00000494582 KLC2Q9H0B6 622 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 PRDM16Q9HAZ2 1276 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
LINC00488-201ENST00000494582 HERC5Q9UII4 1024 aaKnown RBP10.52□□□□□ -0.73
LINC00488-201ENST00000494582 SERPINA10Q9UK55 444 aa10.52□□□□□ -0.73
LINC00488-201ENST00000494582 COL5A2P05997 1499 aaPredicted RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 C7orf72A4D263 438 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PTPN1P18031 435 aaKnown RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 EPHA3P29320 983 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 ELK3P41970 407 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PPP4CP60510 307 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 IRX4P78413 519 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 QRICH1Q2TAL8 776 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 DRICH1Q6PGQ1 229 aaPredicted RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 NUDCD3Q8IVD9 361 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PKP2Q99959 881 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PI4K2AQ9BTU6 479 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PAIP1Q9H074 479 aaKnown RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 Q9H521 79 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 ZNF287Q9HBT7 754 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PCDH9Q9HC56 1237 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 C6orf203Q9P0P8 240 aaPredicted RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 ITGA11Q9UKX5 1188 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 NR2E3Q9Y5X4 410 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 IQANK1A0A1B0GTG1 560 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 KBTBD13C9JR72 458 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 PLOD2O00469 737 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 AVILO75366 819 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 RFPL1O75677 317 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 OCM2P0CE71 109 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 OCMP0CE72 109 aaPredicted RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 KRT5P13647 590 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 CD247P20963 164 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 ARRB2P32121 409 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 RPL22P35268 128 aaKnown RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 ATXN3P54252 364 aaPredicted RBP10.51□□□□□ -0.73
LINC00488-201ENST00000494582 MFAP3P55082 362 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 WASHC5Q12768 1159 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 MAMLD1Q13495 774 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 ATP1A4Q13733 1029 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 SPIDRQ14159 915 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 C6orf183Q5T699 404 aa10.51□□□□□ -0.73
LINC00488-201ENST00000494582 TATDN1Q6P1N9 297 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms