RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 ZNF461Q8TAF7 563 aa11.3□□□□□ -0.6
ATF3-209ENST00000492118 EDEM1Q92611 657 aa11.3□□□□□ -0.6
ATF3-209ENST00000492118 TIFAQ96CG3 184 aa11.3□□□□□ -0.6
ATF3-209ENST00000492118 IGFLR1Q9H665 355 aa11.3□□□□□ -0.6
ATF3-209ENST00000492118 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
ATF3-209ENST00000492118 COL6A3P12111 3177 aa11.3□□□□□ -0.6
ATF3-209ENST00000492118 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 KIF5CO60282 957 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 KRT3P12035 628 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 ELF1P32519 619 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 RFC1P35251 1148 aaPredicted RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 GTF2F1P35269 517 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATF3-209ENST00000492118 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 ATP11AP98196 1134 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 ADGRD2Q7Z7M1 963 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 ADAM32Q8TC27 787 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 SPATA18Q8TC71 538 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 RFFLQ8WZ73 363 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 RAB6CQ9H0N0 254 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 YJEFN3A6XGL0 299 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 HHLA1C9JL84 531 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 E7ENQ6 273 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 BUB1BO60566 1050 aaPredicted RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 LPXNO60711 386 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 CYP1A2P05177 515 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 ATF6P18850 670 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 ERVK-21P61565 698 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 LLGL1Q15334 1064 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 RAB30Q15771 203 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 CFAP221Q4G0U5 840 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 SH3PXD2AQ5TCZ1 1133 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 CCDC70Q6NSX1 233 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 MRPL43Q8N983 215 aaKnown RBP11.29□□□□□ -0.6
ATF3-209ENST00000492118 MSANTD4Q8NCY6 345 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 SLC7A14Q8TBB6 771 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 KLHL5Q96PQ7 755 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 PLVAPQ9BX97 442 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 PARVAQ9NVD7 372 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
ATF3-209ENST00000492118 H3BNC9 293 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 FANCGO15287 622 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 PJA2O43164 708 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 CCP110O43303 1012 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 LILRB3O75022 631 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 ATF2P15336 505 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 TFE3P19532 575 aaPredicted RBP11.28□□□□□ -0.6
ATF3-209ENST00000492118 MAN1A1P33908 653 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 OGDHQ02218 1023 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 TWF1Q12792 350 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 TAF12Q16514 161 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
ATF3-209ENST00000492118 OLFML1Q6UWY5 402 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 TMEM110Q86TL2 294 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 CHCHD3Q9NX63 227 aaKnown RBP11.28□□□□□ -0.6
ATF3-209ENST00000492118 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
ATF3-209ENST00000492118 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 RFPL2O75678 378 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 ZBED1O96006 694 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 ADH1AP07327 375 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 HAPLN1P10915 354 aaPredicted RBP11.27□□□□□ -0.6
ATF3-209ENST00000492118 NAT2P11245 290 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 EPCAMP16422 314 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 CD53P19397 219 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 E2F5Q15329 346 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 DCAF6Q58WW2 860 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 TRNP1Q6NT89 227 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 CC2D1AQ6P1N0 951 aaPredicted RBP11.27□□□□□ -0.6
ATF3-209ENST00000492118 C3orf20Q8ND61 904 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 SPPL2BQ8TCT7 592 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 ACSF2Q96CM8 615 aaPredicted RBP11.27□□□□□ -0.6
ATF3-209ENST00000492118 TRIM11Q96F44 468 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 MUC3BQ9H195 1237 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 CSNK1G1Q9HCP0 422 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 AFF4Q9UHB7 1163 aaKnown RBP11.27□□□□□ -0.6
ATF3-209ENST00000492118 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.6
ATF3-209ENST00000492118 NCANO14594 1321 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 MYO1FO00160 1098 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 CCL16O15467 120 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 ABLIM3O94929 683 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 MYBL1P10243 752 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 TCF4P15884 667 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 PDGFRAP16234 1089 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 CXCR5P32302 372 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 BMP8BP34820 402 aa11.27□□□□□ -0.61
ATF3-209ENST00000492118 ALDH1A3P47895 512 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms