RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ELOVL4Q9GZR5 314 aa15.89■□□□□ 0.13
CDC42SE1-205ENST00000491825 KIF9Q9HAQ2 790 aa15.89■□□□□ 0.13
CDC42SE1-205ENST00000491825 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
CDC42SE1-205ENST00000491825 NCOR2Q9Y618 2525 aa15.89■□□□□ 0.13
CDC42SE1-205ENST00000491825 HRO43593 1189 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 UCHL3P15374 230 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 AVPR1AP37288 418 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 RAD23BP54727 409 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 FANCCQ00597 558 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 APBA1Q02410 837 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 ZNF268Q14587 947 aaPredicted RBP15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 SYCP1Q15431 976 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 TRIM68Q6AZZ1 485 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 LAIR1Q6GTX8 287 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 VSTM1Q6UX27 236 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 ACOT1Q86TX2 421 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 SPATA2LQ8IUW3 424 aaPredicted RBP15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 SYNPOQ8N3V7 929 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 SLC4A11Q8NBS3 891 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 RNF214Q8ND24 703 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 SHC3Q92529 594 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 SECISBP2LQ93073 1101 aaKnown RBP15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 CEP295NLQ96MC4 621 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 GANQ9H2C0 597 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 GKN1Q9NS71 199 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 TDP1Q9NUW8 608 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 THG1LQ9NWX6 298 aaKnown RBP15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 GMEB2Q9UKD1 530 aa15.88■□□□□ 0.13
CDC42SE1-205ENST00000491825 CHURC1-FNTBB4DL54 471 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 PAEPP09466 180 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 HOXA6P31267 233 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 FNTBP49356 437 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 RPL10AP62906 217 aaKnown RBP15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 LMNB2Q03252 620 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 RUNX3Q13761 415 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 NR1I3Q14994 352 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 LPAL2Q16609 132 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 PKN3Q6P5Z2 889 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 GJB7Q6PEY0 223 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 TMEM270Q6UE05 265 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 LONP2Q86WA8 852 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 MRPS31Q92665 395 aaKnown RBP15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 NAP1L5Q96NT1 182 aaPredicted RBP15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 B3GNT5Q9BYG0 378 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 UXTQ9UBK9 157 aaPredicted RBP15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 DNAJC12Q9UKB3 198 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 KIAA1257Q9ULG3 409 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 MAGED2Q9UNF1 606 aaPredicted RBP15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 ATP8B3O60423 1300 aa15.87■□□□□ 0.13
CDC42SE1-205ENST00000491825 TEX33O43247 280 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 KLK7P49862 253 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 UBASH3AP57075 661 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 USP4Q13107 963 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 SRSF5Q13243 272 aaKnown RBP15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 ORC1Q13415 861 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 ZNF394Q53GI3 561 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 ARHGAP17Q68EM7 881 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 FSTL4Q6MZW2 842 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 PAQR9Q6ZVX9 377 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 FAM35AQ86V20 835 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 FUKQ8N0W3 1084 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 C12orf29Q8N999 325 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 RBBP8NLQ8NC74 664 aaPredicted RBP15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 SMARCD1Q96GM5 515 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 SLC22A12Q96S37 553 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 HNRNPABQ99729 332 aaKnown RBP15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 EBF3Q9H4W6 596 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 FAM207AQ9NSI2 230 aaPredicted RBP15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 AJAP1Q9UKB5 411 aaPredicted RBP15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 PCDHB4Q9Y5E5 795 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 FHOD1Q9Y613 1164 aa15.86■□□□□ 0.13
CDC42SE1-205ENST00000491825 PRR5-ARHGAP8B1AHC4 643 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 TRDMT1O14717 391 aaKnown RBP15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 TRIM66O15016 1216 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 TPM3P06753 285 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 RETP07949 1114 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 CCDC130P13994 396 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 ARSAP15289 507 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 CNR2P34972 360 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 PBX1P40424 430 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 ARHGAP8P85298 464 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 SIM2Q14190 667 aaPredicted RBP15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 ZNF77Q15935 545 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 SARM1Q6SZW1 724 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 PRR23BQ6ZRT6 265 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 NEK11Q8NG66 645 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 SLC2A14Q8TDB8 520 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 CYFIP2Q96F07 1278 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 STK33Q9BYT3 514 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 ZNF518BQ9C0D4 1074 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 CSNK1G1Q9HCP0 422 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 FAM49BQ9NUQ9 324 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 RAB23Q9ULC3 237 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 USP18Q9UMW8 372 aa15.85■□□□□ 0.13
CDC42SE1-205ENST00000491825 F8VZ95 297 aa15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 RNF225M0QZC1 329 aaPredicted RBP15.84■□□□□ 0.13
CDC42SE1-205ENST00000491825 EPHB6O15197 1021 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms