RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PRPSAP2O60256 369 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 AMHP03971 560 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 NCAM1P13591 858 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 TYMPP19971 482 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 KDELR1P24390 212 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 CDKN2BP42772 138 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 TNNT3P45378 269 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 ACADSBP45954 432 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 RPL34P49207 117 aaKnown RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 SULT1E1P49888 294 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 CDH6P55285 790 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 KLF1Q13351 362 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 HADHQ16836 314 aaKnown RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 BEND6Q5SZJ8 279 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 WDR93Q6P2C0 686 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 C16orf59Q7L2K0 433 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 AUTS2Q8WXX7 1259 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 VN1R3Q9BXE9 311 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 ARFGAP3Q9NP61 516 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 SZT2Q5T011 3432 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC151A5D8V7 595 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 CAPN9O14815 690 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 PHF2O75151 1096 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 OAZ2O95190 189 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 CPB1P15086 417 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 GGCXP38435 758 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 NPNTQ6UXI9 565 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 RCOR2Q8IZ40 523 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 TOP1MTQ969P6 601 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC114Q96M63 670 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 CWH43Q9H720 699 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 MTUS1Q9ULD2 1270 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 SNX24Q9Y343 169 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 hCG_1818297A0A087WSY0 165 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 TARSL2A2RTX5 802 aaKnown RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 ZBED1O96006 694 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 FAM163BP0C2L3 166 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 COILP38432 576 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 NRLP54845 237 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 DAOAP59103 153 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 WDR5P61964 334 aaKnown RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 HLTFQ14527 1009 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 OTUD1Q5VV17 481 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 JAMLQ86YT9 394 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 LRRC43Q8N309 656 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 TAB3Q8N5C8 712 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 SLC7A14Q8TBB6 771 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 SNRNP25Q9BV90 132 aaKnown RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 PLVAPQ9BX97 442 aa14.55□□□□□ -0.08
SMPD4-219ENST00000491128 DMAP1Q9NPF5 467 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-219ENST00000491128 TMEM189-UBE2V1I3L0A0 370 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 M0QYT0 321 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 CST8O60676 142 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 DNAJB2P25686 324 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 SLC5A3P53794 718 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 EPHB4P54760 987 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 TFDP3Q5H9I0 405 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 RNF19BQ6ZMZ0 732 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 GLIS1Q8NBF1 620 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 KCTD13Q8WZ19 329 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 BADQ92934 168 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 ZCWPW1Q9H0M4 648 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 CXXC1Q9P0U4 656 aaPredicted RBP14.54□□□□□ -0.08
SMPD4-219ENST00000491128 DNPEPQ9ULA0 475 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 CDY1Q9Y6F8 540 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 SF3B1O75533 1304 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMPD4-219ENST00000491128 KRT7P08729 469 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 MATKP42679 507 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 PTGIRP43119 386 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 SNX16P57768 344 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 USP46P62068 366 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 MTMR3Q13615 1198 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 BRD3Q15059 726 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 EFHC1Q5JVL4 640 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 LRRC38Q5VT99 294 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 MFSD5Q6N075 450 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 BHLHA9Q7RTU4 235 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 RFX6Q8HWS3 928 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 ZDHHC17Q8IUH5 632 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 RBM41Q96IZ5 413 aaKnown RBP14.54□□□□□ -0.08
SMPD4-219ENST00000491128 SEPT5Q99719 369 aaPredicted RBP14.54□□□□□ -0.08
SMPD4-219ENST00000491128 DCLK3Q9C098 648 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 DHX35Q9H5Z1 703 aaKnown RBP14.54□□□□□ -0.08
SMPD4-219ENST00000491128 CSNK1G1Q9HCP0 422 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 ANLNQ9NQW6 1124 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 XIRP2A4UGR9 3374 aa14.54□□□□□ -0.08
SMPD4-219ENST00000491128 HSF2BPO75031 334 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 ETS1P14921 441 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 TUBB4BP68371 445 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 BTG3Q14201 252 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 RAB41Q5JT25 222 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC26Q8TAB7 109 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 RIN2Q8WYP3 895 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 DDX23Q9BUQ8 820 aaKnown RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 MRPL9Q9BYD2 267 aaKnown RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 GDF3Q9NR23 364 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 PIGVQ9NUD9 493 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms