RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 COCHO43405 550 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 STX6O43752 255 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 EXOC3O60645 756 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 CUTAO60888 179 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 SYPP08247 313 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 HOXB2P14652 356 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 ENGP17813 658 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 NTSR1P30989 418 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 MAPK8P45983 427 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 SLC5A3P53794 718 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 MYL6P60660 151 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
FDPS-215ENST00000490140 E2F4Q16254 413 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 PEAR1Q5VY43 1037 aaPredicted RBP12.48□□□□□ -0.41
FDPS-215ENST00000490140 GRAMD4Q6IC98 578 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 FAM173BQ6P4H8 233 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 ARMCX6Q7L4S7 300 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 TMEFF1Q8IYR6 380 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 DEFB124Q8NES8 71 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 DHX58Q96C10 678 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 TLR8Q9NR97 1041 aaKnown RBP12.48□□□□□ -0.41
FDPS-215ENST00000490140 KRT82Q9NSB4 513 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 WDR35Q9P2L0 1181 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 SLC6A14Q9UN76 642 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 NEUROG3Q9Y4Z2 214 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 ZZEF1O43149 2961 aa12.48□□□□□ -0.41
FDPS-215ENST00000490140 ASPMQ8IZT6 3477 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 MYO18AQ92614 2054 aaKnown RBP12.47□□□□□ -0.41
FDPS-215ENST00000490140 TNRC6BQ9UPQ9 1833 aaKnown RBP12.47□□□□□ -0.41
FDPS-215ENST00000490140 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
FDPS-215ENST00000490140 GIPC1O14908 333 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 OPHN1O60890 802 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 TULP3O75386 442 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 AP1G2O75843 785 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 YEATS4O95619 227 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 CST3P01034 146 aaPredicted RBP12.47□□□□□ -0.41
FDPS-215ENST00000490140 SERPINF2P08697 491 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 C1QTNF9P0C862 333 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 PTGER3P43115 390 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 SLC6A11P48066 632 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 NCOA4Q13772 614 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 BMT2Q1RMZ1 405 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 MAP7D1Q3KQU3 841 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 ETFBKMTQ8IXQ9 262 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 CHPFQ8IZ52 775 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 TAF4BQ92750 862 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 C7orf25Q9BPX7 421 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 SCNM1Q9BWG6 230 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 IMPG2Q9BZV3 1241 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 XYLT2Q9H1B5 865 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 FAM124BQ9H5Z6 455 aaPredicted RBP12.47□□□□□ -0.41
FDPS-215ENST00000490140 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 PILRBQ9UKJ0 227 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 ZMIZ1Q9ULJ6 1067 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 MTMR6Q9Y217 621 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 PKD1L2Q7Z442 2459 aa12.47□□□□□ -0.41
FDPS-215ENST00000490140 ZFYVE26Q68DK2 2539 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 FAM92AA1XBS5 289 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 CLDN5O00501 218 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 CLIC2O15247 247 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 TLR5O60602 858 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 ADAM23O75077 832 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 RPN1P04843 607 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 GNSP15586 552 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 HOXD13P35453 343 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 CACNA2D1P54289 1103 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 SIM1P81133 766 aaPredicted RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 KNOP1Q1ED39 458 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 SCARA3Q6AZY7 606 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 UNC93AQ86WB7 457 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 PHTF2Q8N3S3 785 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 ZCCHC14Q8WYQ9 949 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 HPS3Q969F9 1004 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 CDK5RAP1Q96SZ6 601 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 GTPBP2Q9BX10 602 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 BBS2Q9BXC9 721 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 SMYD3Q9H7B4 428 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 DNAJC17Q9NVM6 304 aaKnown RBP12.46□□□□□ -0.41
FDPS-215ENST00000490140 IL37Q9NZH6 218 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 GMIPQ9P107 970 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 CALCOCO1Q9P1Z2 691 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 STARD13Q9Y3M8 1113 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms