RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 Q4G0T1 1027 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 C3orf38Q5JPI3 329 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 RNF220Q5VTB9 566 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 SRGAP1Q7Z6B7 1085 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 LRTOMTQ8WZ04 291 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 COQ8BQ96D53 544 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 MSLNLQ96KJ4 702 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 EFHD1Q9BUP0 239 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 STK31Q9BXU1 1019 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 LRRC27Q9C0I9 530 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 CHST8Q9H2A9 424 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 FAM83DQ9H4H8 585 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 DKK4Q9UBT3 224 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 LPAR3Q9UBY5 353 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
HMGN1-218ENST00000490032 AGPSO00116 658 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 DSCR3O14972 297 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 PIAS2O75928 621 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ZBED1O96006 694 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 HGFP14210 728 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 CREB1P16220 341 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ZKSCAN1P17029 563 aaPredicted RBP4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ATF7P17544 494 aaPredicted RBP4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ACVR2AP27037 513 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 NR4A2P43354 598 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 CPT1AP50416 773 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 GATMP50440 423 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 SLC29A2Q14542 456 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ZNF268Q14587 947 aaPredicted RBP4.62□□□□□ -1.67
HMGN1-218ENST00000490032 SESTD1Q86VW0 696 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 FAM156AQ8NDB6 213 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 PRSS3P2Q8NHM4 247 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ZBTB9Q96C00 473 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ZNF668Q96K58 619 aaPredicted RBP4.62□□□□□ -1.67
HMGN1-218ENST00000490032 ZBTB45Q96K62 511 aaPredicted RBP4.62□□□□□ -1.67
HMGN1-218ENST00000490032 MGAT4CQ9UBM8 478 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 CAPN11Q9UMQ6 739 aa4.62□□□□□ -1.67
HMGN1-218ENST00000490032 AQP7P3A6NL99 342 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 A8MVJ9 347 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 EXOC5O00471 708 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 TPP1O14773 563 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 TSPAN6O43657 245 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 PARP1P09874 1014 aaKnown RBP4.61□□□□□ -1.67
HMGN1-218ENST00000490032 BTF3P20290 206 aaKnown RBP4.61□□□□□ -1.67
HMGN1-218ENST00000490032 PGDP52209 483 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 COPB1P53618 953 aaKnown RBP4.61□□□□□ -1.67
HMGN1-218ENST00000490032 CFHR3Q02985 330 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 GBX1Q14549 363 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 PXDC1Q5TGL8 231 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 DARS2Q6PI48 645 aaKnown RBP4.61□□□□□ -1.67
HMGN1-218ENST00000490032 YAF2Q8IY57 180 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 C16orf52Q8NHV5 167 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 HMCESQ96FZ2 354 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 KAZALD1Q96I82 304 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 MID2Q9UJV3 735 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 HDAC9Q9UKV0 1011 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 OGDHLQ9ULD0 1010 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 RIMKLBQ9ULI2 386 aa4.61□□□□□ -1.67
HMGN1-218ENST00000490032 RAB27BO00194 218 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 GOLIM4O00461 696 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 INMTO95050 263 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 FGBP02675 491 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 CD19P15391 556 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 MCM5P33992 734 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 FAM193AP78312 1265 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 RABEP1Q15276 862 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 CYB5RLQ6IPT4 315 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 TMEM65Q6PI78 240 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 DCDC5Q6ZRR9 648 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 CCDC149Q6ZUS6 474 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 USP49Q70CQ1 688 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 LIX1LQ8IVB5 337 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 METTL25Q8N6Q8 603 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 MAFAQ8NHW3 353 aaPredicted RBP4.6□□□□□ -1.67
HMGN1-218ENST00000490032 OSR1Q8TAX0 266 aaPredicted RBP4.6□□□□□ -1.67
HMGN1-218ENST00000490032 SMCR8Q8TEV9 937 aaPredicted RBP4.6□□□□□ -1.67
HMGN1-218ENST00000490032 JDP2Q8WYK2 163 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 MAP4K1Q92918 833 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 ZDHHC12Q96GR4 267 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 ZNF287Q9HBT7 754 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 TRNAU1APQ9NX07 287 aaKnown RBP4.6□□□□□ -1.67
HMGN1-218ENST00000490032 NKX1-2Q9UD57 310 aaPredicted RBP4.6□□□□□ -1.67
HMGN1-218ENST00000490032 VPS51Q9UID3 782 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 AFG3L2Q9Y4W6 797 aa4.6□□□□□ -1.67
HMGN1-218ENST00000490032 TPH1P17752 444 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 THBS4P35443 961 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 ITGA8P53708 1063 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 GHRHRQ02643 423 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 GRM3Q14832 879 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 SEC23BQ15437 767 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 TWIST1Q15672 202 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 KIAA0753Q2KHM9 967 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 AWAT1Q58HT5 328 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 C10orf25Q5T742 122 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 PLAG1Q6DJT9 500 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 AWAT2Q6E213 333 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 MZT2AQ6P582 158 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 DEF8Q6ZN54 512 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 MRPL10Q7Z7H8 261 aaKnown RBP4.59□□□□□ -1.67
HMGN1-218ENST00000490032 EDC3Q96F86 508 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms