RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 RABEP1Q15276 862 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 SURF1Q15526 300 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 ANO4Q32M45 955 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 PREPLQ4J6C6 727 aaPredicted RBP14.84□□□□□ -0.03
VARS-227ENST00000489979 C19orf48Q6RUI8 117 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 MIB1Q86YT6 1006 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 BBS7Q8IWZ6 715 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 NUP93Q8N1F7 819 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 TRIML1Q8N9V2 468 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 TERB1Q8NA31 727 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 FBXO32Q969P5 355 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 ERLEC1Q96DZ1 483 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 HSPA12BQ96MM6 686 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 CLIC6Q96NY7 704 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 B3GNT5Q9BYG0 378 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 ELOVL4Q9GZR5 314 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 PANK4Q9NVE7 773 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 CHORDC1Q9UHD1 332 aaPredicted RBP14.84□□□□□ -0.03
VARS-227ENST00000489979 CYP8B1Q9UNU6 501 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 GPSM3Q9Y4H4 160 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 CLIC4Q9Y696 253 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 SMG1Q96Q15 3661 aaKnown RBP14.84□□□□□ -0.03
VARS-227ENST00000489979 PLXNB3Q9ULL4 1909 aa14.84□□□□□ -0.03
VARS-227ENST00000489979 A0A1W2PQD8 194 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 KIAA0391O15091 583 aaKnown RBP14.83□□□□□ -0.04
VARS-227ENST00000489979 CST3P01034 146 aaPredicted RBP14.83□□□□□ -0.04
VARS-227ENST00000489979 NDUFV2P19404 249 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 TRIP6Q15654 476 aaKnown RBP14.83□□□□□ -0.04
VARS-227ENST00000489979 HECTD3Q5T447 861 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 EGFLAMQ63HQ2 1017 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 NUDT18Q6ZVK8 323 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 TRAPPC11Q7Z392 1133 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 TMEM25Q86YD3 366 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 WDR49Q8IV35 697 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 IPO4Q8TEX9 1081 aaKnown RBP14.83□□□□□ -0.04
VARS-227ENST00000489979 OVCA2Q8WZ82 227 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 WBP2Q969T9 261 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 CCSER2Q9H7U1 834 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 SPHK2Q9NRA0 654 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 FBXO2Q9UK22 296 aaPredicted RBP14.83□□□□□ -0.04
VARS-227ENST00000489979 PCDHB9Q9Y5E1 797 aa14.83□□□□□ -0.04
VARS-227ENST00000489979 CELSR3Q9NYQ7 3312 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 ZBTB24O43167 697 aaPredicted RBP14.82□□□□□ -0.04
VARS-227ENST00000489979 ZNF217O75362 1048 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 RTN3O95197 1032 aaPredicted RBP14.82□□□□□ -0.04
VARS-227ENST00000489979 CD2BP2O95400 341 aaKnown RBP14.82□□□□□ -0.04
VARS-227ENST00000489979 FTH1P19P0C7X4 201 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 IRF1P10914 325 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 TXLNAP40222 546 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 TNNC1P63316 161 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 PLEKHG6Q3KR16 790 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 RGL4Q8IZJ4 473 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 PNPLA1Q8N8W4 532 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 B3GALNT2Q8NCR0 500 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 GLIS3Q8NEA6 775 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 SCAMP5Q8TAC9 235 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 ADAMTS14Q8WXS8 1223 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 ACOX2Q99424 681 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 PANK2Q9BZ23 570 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 CD248Q9HCU0 757 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 HSPBP1Q9NZL4 362 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 STARD13Q9Y3M8 1113 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 SRPRBQ9Y5M8 271 aaKnown RBP14.82□□□□□ -0.04
VARS-227ENST00000489979 LOC400499M0QZD8 3231 aa14.82□□□□□ -0.04
VARS-227ENST00000489979 ACACAQ13085 2346 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 A8MXQ7 604 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 GJB3O75712 270 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 FAM163BP0C2L3 166 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 DLATP10515 647 aaKnown RBP14.81□□□□□ -0.04
VARS-227ENST00000489979 SLC14A1Q13336 389 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 WDR72Q3MJ13 1102 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 SOWAHCQ53LP3 525 aaPredicted RBP14.81□□□□□ -0.04
VARS-227ENST00000489979 SNX30Q5VWJ9 437 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 GRAMD4Q6IC98 578 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 SDE2Q6IQ49 451 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 CCDC73Q6ZRK6 1079 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 CHPFQ8IZ52 775 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 RDH13Q8NBN7 331 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 ZNF419Q96HQ0 510 aaPredicted RBP14.81□□□□□ -0.04
VARS-227ENST00000489979 KCNK16Q96T55 309 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 DUSP9Q99956 384 aaKnown RBP14.81□□□□□ -0.04
VARS-227ENST00000489979 SLC6A17Q9H1V8 727 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 CD93Q9NPY3 652 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 DNAJC17Q9NVM6 304 aaKnown RBP14.81□□□□□ -0.04
VARS-227ENST00000489979 GMIPQ9P107 970 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 RAD54BQ9Y620 910 aa14.81□□□□□ -0.04
VARS-227ENST00000489979 NDUFS2O75306 463 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 TNNI1P19237 187 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 MAOBP27338 520 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 STAT6P42226 847 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 TUBP50607 506 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 SLC5A3P53794 718 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 COL28A1Q2UY09 1125 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 CCNI2Q6ZMN8 369 aaPredicted RBP14.8□□□□□ -0.04
VARS-227ENST00000489979 PDZD3Q86UT5 571 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 NAXDQ8IW45 347 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 CCDC65Q8IXS2 484 aa14.8□□□□□ -0.04
VARS-227ENST00000489979 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms