RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ADH5P11766 374 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 PAX3P23760 479 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 NTSR1P30989 418 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 MCM7P33993 719 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
SSBP1-212ENST00000489378 STRN3Q13033 797 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 EGFLAMQ63HQ2 1017 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 ZPBP2Q6X784 338 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 TRMT11Q7Z4G4 463 aaKnown RBP9.84□□□□□ -0.83
SSBP1-212ENST00000489378 TMPRSS12Q86WS5 348 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 NAT16Q8N8M0 369 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 IPO4Q8TEX9 1081 aaKnown RBP9.84□□□□□ -0.83
SSBP1-212ENST00000489378 DRC1Q96MC2 740 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 RNF38Q9H0F5 515 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 IGSF5Q9NSI5 407 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 SMPD4Q9NXE4 827 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 GMIPQ9P107 970 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 KIAA1024Q9UPX6 916 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 AK5Q9Y6K8 562 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 MYLKQ15746 1914 aa9.84□□□□□ -0.83
SSBP1-212ENST00000489378 A0A1B0GVT2 93 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 TRIM24O15164 1050 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 BCAT2O15382 392 aaPredicted RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 SLC28A2O43868 658 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 KRT10P13645 584 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 PSMA5P28066 241 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 CCT6AP40227 531 aaKnown RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 TSPY1Q01534 308 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 CCDC173Q0VFZ6 552 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 LY6DQ14210 128 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 NFE2Q16621 373 aaPredicted RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 LY6G5CQ5SRR4 150 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 C10orf76Q5T2E6 689 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 IL27RAQ6UWB1 636 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 KIAA1324Q6UXG2 1013 aaKnown RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 RUFY3Q7L099 469 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 SPACA3Q8IXA5 215 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 ETFBKMTQ8IXQ9 262 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 FSIP1Q8NA03 581 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 TMEM161BQ8NDZ6 487 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 SPIRE2Q8WWL2 714 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 BAP1Q92560 729 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 MRGPRX1Q96LB2 322 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 PKMYT1Q99640 499 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 NTPCRQ9BSD7 190 aaKnown RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 RPF1Q9H9Y2 349 aaKnown RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 ABCB6Q9NP58 842 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 CFAP97Q9P2B7 532 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 RAD54BQ9Y620 910 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 NOTCH2Q04721 2471 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 UBR5O95071 2799 aaPredicted RBP9.83□□□□□ -0.84
SSBP1-212ENST00000489378 MYH11P35749 1972 aa9.83□□□□□ -0.84
SSBP1-212ENST00000489378 E9PMD0 336 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SLC9A3R1O14745 358 aaPredicted RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TRIM66O15016 1216 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TULP3O75386 442 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CDKL5O76039 1030 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CTDNEP1O95476 244 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 NCAM1P13591 858 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 C6P13671 934 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 JUPP14923 745 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 MUTP22033 750 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 ACAT1P24752 427 aaKnown RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CD6P30203 668 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TAF6P49848 677 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SLC7A9P82251 487 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 PDIA5Q14554 519 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 DCAF12L1Q5VU92 463 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SKAP1Q86WV1 359 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SCN4BQ8IWT1 228 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CHPFQ8IZ52 775 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 LEO1Q8WVC0 666 aaPredicted RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 WBP1Q96G27 269 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TOE1Q96GM8 510 aaKnown RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TSPAN18Q96SJ8 248 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 GPR174Q9BXC1 333 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CCSER1Q9C0I3 900 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 DDX19AQ9NUU7 478 aaKnown RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 NFE2L3Q9Y4A8 694 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CPQQ9Y646 472 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SLCO1B1Q9Y6L6 691 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 AHCTF1Q8WYP5 2266 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 KCNK3O14649 394 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 HCRTO43612 131 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 IL12RB1P42701 662 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 GRK6P43250 576 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 CSNK1EP49674 416 aaKnown RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 PDE6CP51160 858 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TARDBPQ13148 414 aaKnown RBP eCLIP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 TMEM132DQ14C87 1099 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 RTP5Q14D33 572 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 SUZ12Q15022 739 aaKnown RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 KIF19Q2TAC6 998 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 PREPLQ4J6C6 727 aaPredicted RBP9.82□□□□□ -0.84
SSBP1-212ENST00000489378 BMP2KLQ5H9B9 411 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 COLEC12Q5KU26 742 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 HAUS3Q68CZ6 603 aa9.82□□□□□ -0.84
SSBP1-212ENST00000489378 RINT1Q6NUQ1 792 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms