RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SNX30Q5VWJ9 437 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 TTI2Q6NXR4 508 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 C12orf40Q86WS4 652 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 SYNPOQ8N3V7 929 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 RPLP0P6Q8NHW5 317 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 RUBCNQ92622 972 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 TMEM176AQ96HP8 235 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 HHIPQ96QV1 700 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 FAM126AQ9BYI3 521 aaPredicted RBP14.8□□□□□ -0.04
VTI1A-206ENST00000489142 EPC1Q9H2F5 836 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 FBXO44Q9H4M3 255 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 NMUR1Q9HB89 426 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 SPTBN4Q9H254 2564 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 HRO43593 1189 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 DRD1P21728 446 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 SLC6A11P48066 632 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 KDSRQ06136 332 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 CUL2Q13617 745 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 DHCR24Q15392 516 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 DDX42Q86XP3 938 aaKnown RBP eCLIP14.79□□□□□ -0.04
VTI1A-206ENST00000489142 BBS7Q8IWZ6 715 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 ELOA2Q8IYF1 753 aaPredicted RBP14.79□□□□□ -0.04
VTI1A-206ENST00000489142 ADGRG2Q8IZP9 1017 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 DUSP16Q9BY84 665 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 TLR8Q9NR97 1041 aaKnown RBP14.79□□□□□ -0.04
VTI1A-206ENST00000489142 COMMD8Q9NX08 183 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 SLC8A2Q9UPR5 921 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 SCML2Q9UQR0 700 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
VTI1A-206ENST00000489142 PAPSS2O95340 614 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-206ENST00000489142 CALCAP01258 141 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 FMO5P49326 533 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 TUBP50607 506 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 KIF11P52732 1056 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 GOLGA7BQ2TAP0 167 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 LY6G5CQ5SRR4 150 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 RHBDF2Q6PJF5 856 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 GTPBP4Q9BZE4 634 aaKnown RBP14.78□□□□□ -0.04
VTI1A-206ENST00000489142 NAGPAQ9UK23 515 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 COQ4Q9Y3A0 265 aa14.78□□□□□ -0.04
VTI1A-206ENST00000489142 RALGAPA1Q6GYQ0 2036 aa14.77□□□□□ -0.04
VTI1A-206ENST00000489142 E2F8A0AVK6 867 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 K7EQS6 105 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 TULP2O00295 520 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 SLC9A3R1O14745 358 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-206ENST00000489142 ADH5P11766 374 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 RARGP13631 454 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 PAK1Q13153 545 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 SIM2Q14190 667 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-206ENST00000489142 C2orf27AQ580R0 203 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 C10orf120Q5SQS8 335 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 SCD5Q86SK9 330 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 LONP2Q86WA8 852 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 TTC30AQ86WT1 665 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 NAT16Q8N8M0 369 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 NDRG1Q92597 394 aaKnown RBP14.77□□□□□ -0.05
VTI1A-206ENST00000489142 KAT5Q92993 513 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 KLF16Q9BXK1 252 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-206ENST00000489142 METTL14Q9HCE5 456 aaKnown RBP14.77□□□□□ -0.05
VTI1A-206ENST00000489142 ZDHHC4Q9NPG8 344 aa14.77□□□□□ -0.05
VTI1A-206ENST00000489142 DCHS1Q96JQ0 3298 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 BICDL2A1A5D9 508 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 ATG13O75143 517 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 ADH1CP00326 375 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 CD19P15391 556 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 UBE2HP62256 183 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 FBXO43Q4G163 708 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 PIGZQ86VD9 579 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 WDR5BQ86VZ2 330 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 MIB1Q86YT6 1006 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 CCDC33Q8N5R6 958 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 UBR7Q8N806 425 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 UBA3Q8TBC4 463 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 EXOC4Q96A65 974 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 SRRTQ9BXP5 876 aaKnown RBP14.76□□□□□ -0.05
VTI1A-206ENST00000489142 DNAI2Q9GZS0 605 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 PNPLA8Q9NP80 782 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 CYLDQ9NQC7 956 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.76□□□□□ -0.05
VTI1A-206ENST00000489142 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 TBC1D14Q9P2M4 693 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 RAB23Q9ULC3 237 aa14.76□□□□□ -0.05
VTI1A-206ENST00000489142 TRIM24O15164 1050 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 HMBSP08397 361 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 ATP5C1P36542 298 aaKnown RBP14.75□□□□□ -0.05
VTI1A-206ENST00000489142 PPP1R2P41236 205 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 DMC1Q14565 340 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 ANO4Q32M45 955 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 SGO2Q562F6 1265 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 EMC10Q5UCC4 262 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 ARHGAP17Q68EM7 881 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 CEP68Q76N32 757 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 RRAGAQ7L523 313 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 CCDC186Q7Z3E2 898 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 TMEM25Q86YD3 366 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 ARHGEF19Q8IW93 802 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 PPM1KQ8N3J5 372 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 TTC39CQ8N584 583 aa14.75□□□□□ -0.05
VTI1A-206ENST00000489142 USP33Q8TEY7 942 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms