RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 PNPLA8Q9NP80 782 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CYLDQ9NQC7 956 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 COMMD8Q9NX08 183 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RAB23Q9ULC3 237 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 WDFY3Q8IZQ1 3526 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ADAMTS9Q9P2N4 1935 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 LRP3O75074 770 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ATG13O75143 517 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RETP07949 1114 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ADH5P11766 374 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SEC13P55735 322 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 LMNB2Q03252 620 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 BECN1Q14457 450 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DMC1Q14565 340 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RSPO4Q2I0M5 234 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PPP1R26Q5T8A7 1209 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RHBDF2Q6PJF5 856 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 BBS7Q8IWZ6 715 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ETFBKMTQ8IXQ9 262 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ADGRG2Q8IZP9 1017 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FBXL13Q8NEE6 735 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 USP33Q8TEY7 942 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FBXO44Q9H4M3 255 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 NMUR1Q9HB89 426 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SLC8A2Q9UPR5 921 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PCDHA5Q9Y5H7 936 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FRYQ5TBA9 3013 aa11.85□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PI4KAP42356 2102 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MED19A0JLT2 244 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SLC9A3R1O14745 358 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HOXC11O43248 304 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RPP40O75818 363 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ADH1CP00326 375 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SLC6A11P48066 632 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 KIF11P52732 1056 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RAD23BP54727 409 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 NUCB2P80303 420 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 KDSRQ06136 332 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 NR1H3Q13133 447 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PUM1Q14671 1186 aaKnown RBP eCLIP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 LY6G5CQ5SRR4 150 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ANKRD40Q6AI12 368 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PRR23CQ6ZRP0 262 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CCDC186Q7Z3E2 898 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 KBTBD6Q86V97 674 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CAMKK1Q8N5S9 505 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 OTUB2Q96DC9 234 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CYFIP2Q96F07 1278 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 P2RY11Q96G91 374 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TLR8Q9NR97 1041 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CISHQ9NSE2 258 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 COQ4Q9Y3A0 265 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PCDH15Q96QU1 1955 aa11.84□□□□□ -0.51
RAB11FIP3-210ENST00000487899 A0A1W2PQH9 124 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 MDM4O15151 490 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CETN3O15182 167 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 EPN2O95208 641 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 APBB3O95704 486 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TBX18O95935 607 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 IRF1P10914 325 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 BMP6P22004 513 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 KIR2DL1P43626 348 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CSRP2Q16527 193 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 C2orf27AQ580R0 203 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 CEP68Q76N32 757 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 DGLUCYQ7Z3D6 616 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SCD5Q86SK9 330 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 UBR7Q8N806 425 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 MDGA1Q8NFP4 955 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 TATDN2Q93075 761 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 SMARCE1Q969G3 411 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 FAXDC2Q96IV6 333 aa11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 KLF16Q9BXK1 252 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-210ENST00000487899 ZDHHC4Q9NPG8 344 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms