RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 COL23A1Q86Y22 540 aaPredicted RBP4.86□□□□□ -1.63
CCDC66-221ENST00000487739 LIX1LQ8IVB5 337 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 SAMD14Q8IZD0 417 aaPredicted RBP4.86□□□□□ -1.63
CCDC66-221ENST00000487739 NGDNQ8NEJ9 315 aaKnown RBP4.86□□□□□ -1.63
CCDC66-221ENST00000487739 NSMCE1Q8WV22 266 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 TRIM43Q96BQ3 446 aaPredicted RBP4.86□□□□□ -1.63
CCDC66-221ENST00000487739 SIGLEC11Q96RL6 698 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 TMEM60Q9H2L4 133 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 GAR1Q9NY12 217 aaKnown RBP4.86□□□□□ -1.63
CCDC66-221ENST00000487739 ZIM2Q9NZV7 527 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 MGAT4CQ9UBM8 478 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 CACNA1IQ9P0X4 2223 aa4.86□□□□□ -1.63
CCDC66-221ENST00000487739 H7C4K7 107 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 RRP9O43818 475 aaKnown RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 U2AF1L5P0DN76 240 aaPredicted RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 BRAFP15056 766 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 TKTP29401 623 aaKnown RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 PTDSS1P48651 473 aaKnown RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 SUMO3P55854 103 aaPredicted RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 U2AF1Q01081 240 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 ID2Q02363 134 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 TRIM71Q2Q1W2 868 aaKnown RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 TMTC4Q5T4D3 741 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 CRELD2Q6UXH1 353 aaPredicted RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 RANBP10Q6VN20 620 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 DEF8Q6ZN54 512 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 KCTD20Q7Z5Y7 419 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 ZDHHC17Q8IUH5 632 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 C16orf71Q8IYS4 520 aaPredicted RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 CHPFQ8IZ52 775 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 SMCR8Q8TEV9 937 aaPredicted RBP4.85□□□□□ -1.63
CCDC66-221ENST00000487739 STAG1Q8WVM7 1258 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 VCPIP1Q96JH7 1222 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 C22orf23Q9BZE7 217 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 SACM1LQ9NTJ5 587 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 STK32BQ9NY57 414 aa4.85□□□□□ -1.63
CCDC66-221ENST00000487739 ZMYM2Q9UBW7 1377 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 USP19O94966 1318 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 FAM90A10PA6NDY2 464 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 ISM1B1AKI9 464 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 EXOC5O00471 708 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 FRS3O43559 492 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 PIAS2O75928 621 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 HGFP14210 728 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 CD19P15391 556 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 PGDP52209 483 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 CFHR3Q02985 330 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 SRSF1Q07955 248 aaKnown RBP eCLIP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 ARHGEF7Q14155 803 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 CC2D1BQ5T0F9 858 aaKnown RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 SWSAP1Q6NVH7 229 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 KIAA0319LQ8IZA0 1049 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 RUNDC1Q96C34 613 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 NMD3Q96D46 503 aaKnown RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 WDYHV1Q96HA8 205 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 ZNF668Q96K58 619 aaPredicted RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 ZBTB45Q96K62 511 aaPredicted RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 STK31Q9BXU1 1019 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 DHX36Q9H2U1 1008 aaKnown RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 FOXP1Q9H334 677 aaPredicted RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 CPNE7Q9UBL6 633 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 AFF4Q9UHB7 1163 aaKnown RBP4.84□□□□□ -1.63
CCDC66-221ENST00000487739 HDAC9Q9UKV0 1011 aa4.84□□□□□ -1.63
CCDC66-221ENST00000487739 FER1L4A9Z1Z3 1794 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CFAP69A5D8W1 941 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 OAZ2O95190 189 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CBSLP0DN79 551 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CCKBRP32239 447 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 THBS4P35443 961 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CBSP35520 551 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 GATMP50440 423 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 ITGA8P53708 1063 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 LINC00205P59089 165 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 RPS13P62277 151 aaKnown RBP4.83□□□□□ -1.64
CCDC66-221ENST00000487739 IGBP1P78318 339 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CFHR1Q03591 330 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
CCDC66-221ENST00000487739 SEC23BQ15437 767 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 ZNF750Q32MQ0 723 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 CXorf57Q6NSI4 855 aaKnown RBP4.83□□□□□ -1.64
CCDC66-221ENST00000487739 APOA5Q6Q788 366 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 ANKRD13BQ86YJ7 626 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 NKX1-2Q9UD57 310 aaPredicted RBP4.83□□□□□ -1.64
CCDC66-221ENST00000487739 TPCN1Q9ULQ1 816 aa4.83□□□□□ -1.64
CCDC66-221ENST00000487739 AQP7P3A6NL99 342 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 A8MVJ9 347 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 TLR2O60603 784 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 CYP19A1P11511 503 aaPredicted RBP4.82□□□□□ -1.64
CCDC66-221ENST00000487739 ATF7P17544 494 aaPredicted RBP4.82□□□□□ -1.64
CCDC66-221ENST00000487739 ACVR2AP27037 513 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 SLC29A2Q14542 456 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 MFSD13AQ14CX5 517 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 NPY5RQ15761 445 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 ST3GAL2Q16842 350 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 PIP4P1Q86T03 277 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 C12orf76Q8N812 135 aaPredicted RBP4.82□□□□□ -1.64
CCDC66-221ENST00000487739 PNPLA1Q8N8W4 532 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 HIC2Q96JB3 615 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 ZCWPW1Q9H0M4 648 aa4.82□□□□□ -1.64
CCDC66-221ENST00000487739 FAM83DQ9H4H8 585 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms