RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NPTX2P47972 431 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 PTDSS1P48651 473 aaKnown RBP4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 ALDH9A1P49189 494 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 NDUFV1P49821 464 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 COPAP53621 1224 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 FPGSQ05932 587 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 GRM1Q13255 1194 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 BLMHQ13867 455 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 HLXQ14774 488 aaPredicted RBP4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 PUM3Q15397 648 aaKnown RBP4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 NPY5RQ15761 445 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 TMEM119Q4V9L6 283 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 INO80DQ53TQ3 878 aaPredicted RBP4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 FCRL6Q6DN72 434 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 FBXO38Q6PIJ6 1188 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 USP17L6PQ6QN14 398 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF517Q6ZMY9 492 aaPredicted RBP4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 TECPR1Q7Z6L1 1165 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF280BQ86YH2 543 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 ADGRG5Q8IZF4 528 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 SLC30A5Q8TAD4 765 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 SNX19Q92543 992 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 MUL1Q969V5 352 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 HERPUD2Q9BSE4 406 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 PTDSS2Q9BVG9 487 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 MTMR4Q9NYA4 1195 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 SLC39A10Q9ULF5 831 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 LRP12Q9Y561 859 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 CDY1Q9Y6F8 540 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 CNTNAP2Q9UHC6 1331 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 A0A087WZ62 844 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 hCG_1642624A0A1W2PR95 340 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 FAM234BA2RU67 622 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 CCDC151A5D8V7 595 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 GOLGA6L3A6NEY3 463 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 AQP7P3A6NL99 342 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 VWC2LB2RUY7 222 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 F5H697 171 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 PODXLO00592 558 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 KCNQ3O43525 872 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 RRP9O43818 475 aaKnown RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 CREB3O43889 395 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 NBNO60934 754 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 SKAP2O75563 359 aaPredicted RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 NDST3O95803 873 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 IDEP14735 1019 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 GABRB3P28472 473 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 PPIFP30405 207 aaKnown RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 CHKAP35790 457 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 HALP42357 657 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 DGKEP52429 567 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 TUBA4AP68366 448 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 MYO1EQ12965 1108 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 ELF2Q15723 593 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 ZIK1Q3SY52 487 aaPredicted RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 TUBB8Q3ZCM7 444 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 CD300EQ496F6 205 aaPredicted RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 CACHD1Q5VU97 1274 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 PLAG1Q6DJT9 500 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 AWAT2Q6E213 333 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 SFRP4Q6FHJ7 346 aaPredicted RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 CCDC174Q6PII3 467 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF66Q6ZN08 573 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 RASAL3Q86YV0 1011 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 FAM9AQ8IZU1 332 aaPredicted RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 ANKRD42Q8N9B4 389 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 BPIFB1Q8TDL5 484 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 TMEM125Q96AQ2 219 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 SNX27Q96L92 541 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 OSBPL9Q96SU4 736 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 NELL2Q99435 816 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 FAM83DQ9H4H8 585 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 NECTIN3Q9NQS3 549 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 RGL1Q9NZL6 768 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 DNMT3BQ9UBC3 853 aaKnown RBP4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 DKK4Q9UBT3 224 aa4.19□□□□□ -1.74
SNRNP27-204ENST00000487029 A0A0B4J269 797 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 hCG_1984214I3L0E3 225 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 TRIAP1O43715 76 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 PIAS2O75928 621 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 RASAL1O95294 804 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 CSTBP04080 98 aaKnown RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 CHRM2P08172 466 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 KCNA3P22001 575 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 CD6P30203 668 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 GRK6P43250 576 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 PRKAG1P54619 331 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 SOX10P56693 466 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 SLC10A2Q12908 348 aaPredicted RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 TUBB3Q13509 450 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 E2F2Q14209 437 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 TXNRD1Q16881 649 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF750Q32MQ0 723 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 CCDC38Q502W7 563 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 RBM20Q5T481 1227 aaKnown RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 ARHGAP40Q5TG30 622 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 KCTD20Q7Z5Y7 419 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 KRT73Q86Y46 540 aa4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 NKAPQ8N5F7 415 aaKnown RBP4.18□□□□□ -1.74
SNRNP27-204ENST00000487029 GLIS1Q8NBF1 620 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms