RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CLDND1Q9NY35 253 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 FNIP2Q9P278 1114 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 HESX1Q9UBX0 185 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 AFF4Q9UHB7 1163 aaKnown RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 TSPAN16Q9UKR8 245 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 MAGED2Q9UNF1 606 aaPredicted RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 HCFC2Q9Y5Z7 792 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 PLXNA3P51805 1871 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 ATP8B3O60423 1300 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 ITIH6Q6UXX5 1313 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 MYH10P35580 1976 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 TMCO5BA8MYB1 307 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 F8VP50 259 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CCL16O15467 120 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 MED7O43513 233 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 MFAP3LO75121 409 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 RFPL2O75678 378 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 MICAL2O94851 1124 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 VNN2O95498 520 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 GLP2RO95838 553 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 LRG1P02750 347 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 PTMAP06454 111 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 C8AP07357 584 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 MMEP08473 750 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 PAEPP09466 180 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CCDC172P0C7W6 258 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 FAM200BP0CF97 657 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 HAPLN1P10915 354 aaPredicted RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 ATF2P15336 505 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CYP11B1P15538 503 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 FERP16591 822 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 ALDH1A3P47895 512 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 RGS7P49802 495 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CLCN4P51793 760 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CACNA2D1P54289 1103 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 JAM2P57087 298 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 BPIFB4P59827 614 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 PLD1Q13393 1074 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 MTMR3Q13615 1198 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 NFE2Q16621 373 aaPredicted RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 FIGNQ5HY92 759 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 RARS2Q5T160 578 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 DENND1BQ6P3S1 775 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 FAM171BQ6P995 826 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 TMC5Q6UXY8 1006 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 PHLDB2Q86SQ0 1253 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 NOP9Q86U38 636 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 DNAAF5Q86Y56 855 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 FAM71AQ8IYT1 594 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CRYBG2Q8N1P7 616 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 PGBD3Q8N328 593 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 C1orf131Q8NDD1 294 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 MYCBPAPQ8TBZ2 947 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 SPATA18Q8TC71 538 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 SPPL2BQ8TCT7 592 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 ZNF606Q8WXB4 792 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CASP10Q92851 521 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 SECISBP2LQ93073 1101 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 KCNK16Q96T55 309 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 ZSWIM1Q9BR11 485 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 TTYH3Q9C0H2 523 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 DEF6Q9H4E7 631 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 HAUS4Q9H6D7 363 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 ST7Q9NRC1 585 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 KRT82Q9NSB4 513 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 ZNHIT6Q9NWK9 470 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 LMCD1Q9NZU5 365 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 FKBPLQ9UIM3 349 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 CAPN11Q9UMQ6 739 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 DAAM1Q9Y4D1 1078 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 YIPF1Q9Y548 306 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 INSL5Q9Y5Q6 135 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 IRAK3Q9Y616 596 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 C5orf42Q9H799 3197 aa5.95□□□□□ -1.46
COPS3-208ENST00000486032 TCF20Q9UGU0 1960 aaKnown RBP5.95□□□□□ -1.46
COPS3-208ENST00000486032 BRWD1Q9NSI6 2320 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CCDC195A0A1B0GUA6 201 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 A0A1W2PQJ5 194 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 SLC38A8A6NNN8 435 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 TULP2O00295 520 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 O00370 1275 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 TBX10O75333 385 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 BEST1O76090 585 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ABLIM3O94929 683 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ABL1P00519 1130 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 PLEKP08567 350 aaPredicted RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 SRGAP2BP0DMP2 458 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 MYL4P12829 197 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 LCP1P13796 627 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 NPR3P17342 541 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 ADH6P28332 368 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 CDC25BP30305 580 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 LTBRP36941 435 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 TUFMP49411 452 aaKnown RBP5.94□□□□□ -1.46
COPS3-208ENST00000486032 ZNF132P52740 706 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 SLC8A3P57103 927 aa5.94□□□□□ -1.46
COPS3-208ENST00000486032 RPL10AP62906 217 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms