RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ETV3LQ6ZN32 361 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 C11orf57Q6ZUT1 292 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 SPRED1Q7Z699 444 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 DCP2Q8IU60 420 aaKnown RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 PEX5LQ8IYB4 626 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ESX1Q8N693 406 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 TMCO5AQ8N6Q1 288 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 AVL9Q8NBF6 648 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 SPC24Q8NBT2 197 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ANKRD20A12PQ8NF67 263 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 CTCFLQ8NI51 663 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 HDAC7Q8WUI4 952 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 STON2Q8WXE9 905 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 MRPS27Q92552 414 aaKnown RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 OSBP2Q969R2 916 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 C1orf159Q96HA4 380 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ERO1AQ96HE7 468 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ZNF845Q96IR2 970 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 EPSTI1Q96J88 318 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 CNDP1Q96KN2 507 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 RBM14Q96PK6 669 aaKnown RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 TBCBQ99426 244 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 NAP1L3Q99457 506 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 EYA3Q99504 573 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 NUP88Q99567 741 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 CDC6Q99741 560 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 TXLNGYQ9BZA5 131 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 EDEM3Q9BZQ6 932 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 TRIM7Q9C029 511 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 AP5M1Q9H0R1 490 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 C2orf40Q9H1Z8 148 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 RSAD1Q9HA92 442 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 WASH6PQ9NQA3 447 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 NTMQ9P121 344 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 AASSQ9UDR5 926 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ST6GALNAC2Q9UJ37 374 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 SLC13A4Q9UKG4 626 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 PCDHA7Q9UN72 937 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 C19orf53Q9UNZ5 99 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 APOBEC2Q9Y235 224 aaKnown RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ATP11BQ9Y2G3 1177 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 PTPN22Q9Y2R2 807 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 SNX8Q9Y5X2 465 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 ZFP37Q9Y6Q3 630 aaPredicted RBP4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 SPATA31A3Q5VYP0 1347 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 WDR17Q8IZU2 1322 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 LAMA4Q16363 1823 aa4.29□□□□□ -1.72
PRPF38B-205ENST00000485810 A0A087X0M5 115 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 A0A1B0GUL7 405 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 A0A1B0GX30 115 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 BLACEA4D250 179 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 LRRC14BA6NHZ5 514 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 A6NLC8 198 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 BECN2A8MW95 431 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 F5H0A9 414 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 M0R2C6 588 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 SGK1O00141 431 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 TPP1O14773 563 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 CEP104O60308 925 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 MSCO60682 206 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 FGFR1OPO95684 399 aaKnown RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 ZBED1O96006 694 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 PCCAP05165 728 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 DHRS4L1P0CG22 281 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 CYP2C8P10632 490 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 ALOX12P18054 663 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 ARF4P18085 180 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 HDCP19113 662 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 U2AF2P26368 475 aaKnown RBP eCLIP4.28□□□□□ -1.722e-7■■■■□ 20.2
PRPF38B-205ENST00000485810 MAPK3P27361 379 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 PBLDP30039 288 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 THBS2P35442 1172 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 LTBRP36941 435 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 ACVRL1P37023 503 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 LIFRP42702 1097 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 MATR3P43243 847 aaKnown RBP eCLIP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 CENPAP49450 140 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 SULT1E1P49888 294 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 CLCN2P51788 898 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 USP14P54578 494 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 ANTXR2P58335 489 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 RNASE9P60153 205 aaKnown RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 KIF23Q02241 960 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 GABPB1Q06547 395 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 KLHL30Q0D2K2 578 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 PRKG1Q13976 671 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 SLC39A14Q15043 492 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 UBE3CQ15386 1083 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 SHROOM1Q2M3G4 852 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 MMEL1Q495T6 779 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 PRR31Q5SQ13 230 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 E4F1Q66K89 784 aaPredicted RBP4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 IQSEC1Q6DN90 963 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 PKN3Q6P5Z2 889 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 PACS1Q6VY07 963 aa4.28□□□□□ -1.72
PRPF38B-205ENST00000485810 LIMS2Q7Z4I7 341 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms