RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 NSMCE1Q8WV22 266 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 SPSB4Q96A44 273 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 WDYHV1Q96HA8 205 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 PPP1R9BQ96SB3 815 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 POLR3GLQ9BT43 218 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 TRIM5Q9C035 493 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 A1CFQ9NQ94 594 aaKnown RBP3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 XPNPEP3Q9NQH7 507 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 SNX15Q9NRS6 342 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 SACM1LQ9NTJ5 587 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 STK32BQ9NY57 414 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 PI4KBQ9UBF8 816 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 CPNE7Q9UBL6 633 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 MGAT4CQ9UBM8 478 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 TTC3P53804 2025 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 M0R3H8 397 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 AGPSO00116 658 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 MCM5P33992 734 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 SUMO3P55854 103 aaPredicted RBP3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 HTRA4P83105 476 aaPredicted RBP3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 GPR162Q16538 588 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 INSCQ1MX18 579 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 C4orf46Q504U0 113 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 RANBP10Q6VN20 620 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 MAEAQ7L5Y9 396 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 PIP4P1Q86T03 277 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 LIX1LQ8IVB5 337 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 STAG1Q8WVM7 1258 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 HS6ST2Q96MM7 605 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 C22orf23Q9BZE7 217 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 HEY2Q9UBP5 337 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 ASAP1Q9ULH1 1129 aa3.79□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZMYM2Q9UBW7 1377 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 CCDC187A0A096LP49 1063 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 LOC102723971A0A1B0GUV8 181 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 E2F8A0AVK6 867 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 MBD3L4A6NDZ8 208 aaPredicted RBP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 MBD3L3A6NE82 208 aaPredicted RBP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 PYCARD-AS1I3L0S3 204 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 EXOC5O00471 708 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 TLR2O60603 784 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 CTNND1O60716 968 aaKnown RBP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 RASSF9O75901 435 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 SCP2P22307 547 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 THBS4P35443 961 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 PTDSS1P48651 473 aaKnown RBP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 YPEL5P62699 121 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 TIAL1Q01085 375 aaKnown RBP eCLIP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 ID2Q02363 134 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 CFHR1Q03591 330 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 DEUP1Q05D60 604 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 KCNB1Q14721 858 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 TWIST1Q15672 202 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 LEXMQ3ZCV2 418 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 DENND2CQ68D51 928 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZNF548Q8NEK5 533 aaPredicted RBP3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 ADAMTS15Q8TE58 950 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 STK31Q9BXU1 1019 aa3.78□□□□□ -1.8
LAPTM4A-202ENST00000483117 IGKV2D-30A0A075B6S6 120 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 TRIM43BA6NCK2 446 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CAPN8A6NHC0 703 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CD8B2A6NJW9 211 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CLIC1O00299 241 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CCP110O43303 1012 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 TMPRSS11DO60235 418 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 PDGFRBP09619 1106 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CCKARP32238 428 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 PGDP52209 483 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CFHR3Q02985 330 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 SLC14A1Q13336 389 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 MFSD13AQ14CX5 517 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CNN3Q15417 329 aaKnown RBP3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 C3orf38Q5JPI3 329 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CC2D1BQ5T0F9 858 aaKnown RBP3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 APOA5Q6Q788 366 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 VSTM1Q6UX27 236 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CHPFQ8IZ52 775 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 METTL25Q8N6Q8 603 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 C11orf44Q8N8P7 122 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 IGFBPL1Q8WX77 278 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 TRIM43Q96BQ3 446 aaPredicted RBP3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 CDH19Q9H159 772 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 TYW1Q9NV66 732 aaKnown RBP3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 DDX56Q9NY93 547 aaKnown RBP3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 ZIM2Q9NZV7 527 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 HDAC9Q9UKV0 1011 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 LRP12Q9Y561 859 aa3.77□□□□□ -1.81
LAPTM4A-202ENST00000483117 hCG_2014768A0A024R1R8 64 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 CFAP69A5D8W1 941 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 FAM90A10PA6NDY2 464 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 H3BNX3 289 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 RFPL1O75677 317 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 PIAS2O75928 621 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ALPLP05186 524 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 CBSLP0DN79 551 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 CTSAP10619 480 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms