RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 LILRA6Q6PI73 481 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 CHRDL2Q6WN34 429 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 BHLHA9Q7RTU4 235 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 DEFB106AQ8N104 65 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.42■□□□□ 0.54
UPF3A-206ENST00000480362 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 CEP295NLQ96MC4 621 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 DDX23Q9BUQ8 820 aaKnown RBP18.42■□□□□ 0.54
UPF3A-206ENST00000480362 FBXO44Q9H4M3 255 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 COMMD8Q9NX08 183 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.42■□□□□ 0.54
UPF3A-206ENST00000480362 DPYSL4O14531 572 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 DAB1O75553 588 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 LTFP02788 710 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 YWHAQP27348 245 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 MAN1A1P33908 653 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 RPS6KA1Q15418 735 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 CCDC14Q49A88 953 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 CC2D1AQ6P1N0 951 aaPredicted RBP18.41■□□□□ 0.54
UPF3A-206ENST00000480362 NIPA2Q8N8Q9 360 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 GOLGA1Q92805 767 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 CFAP57Q96MR6 1250 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 CNPY3Q9BT09 278 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 PRO3102Q9H379 93 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 POPDC2Q9HBU9 364 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 SCML2Q9UQR0 700 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 YIPF1Q9Y548 306 aa18.41■□□□□ 0.54
UPF3A-206ENST00000480362 FYNP06241 537 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 SDC4P31431 198 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 MATKP42679 507 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 SSR1P43307 286 aaKnown RBP18.4■□□□□ 0.54
UPF3A-206ENST00000480362 ACAP1Q15027 740 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 C15orf59Q2T9L4 293 aaPredicted RBP18.4■□□□□ 0.54
UPF3A-206ENST00000480362 DCAF6Q58WW2 860 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 DAB2IPQ5VWQ8 1189 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 BSPRYQ5W0U4 402 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 PAPD7Q5XG87 772 aaKnown RBP18.4■□□□□ 0.54
UPF3A-206ENST00000480362 KREMEN2Q8NCW0 462 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 TIFAQ96CG3 184 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 HES6Q96HZ4 224 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 SLC2A13Q96QE2 648 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 FBXW11Q9UKB1 542 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 NAALADL1Q9UQQ1 740 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 INSL5Q9Y5Q6 135 aa18.4■□□□□ 0.54
UPF3A-206ENST00000480362 FAM92AA1XBS5 289 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 CAPN9O14815 690 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
UPF3A-206ENST00000480362 GLUD1P00367 558 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 NOS2P35228 1153 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 PTPN9P43378 593 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 DNA2P51530 1060 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 YWHAGP61981 247 aaKnown RBP eCLIP18.39■□□□□ 0.53
UPF3A-206ENST00000480362 SMAD3P84022 425 aaKnown RBP18.39■□□□□ 0.53
UPF3A-206ENST00000480362 TWF1Q12792 350 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 SH3PXD2AQ5TCZ1 1133 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 SYPL2Q5VXT5 272 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 MON1AQ86VX9 555 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 ARFGAP1Q8N6T3 406 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 EDEM1Q92611 657 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 CD101Q93033 1021 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 FBXO32Q969P5 355 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 LMAN2LQ9H0V9 348 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 SNX12Q9UMY4 172 aa18.39■□□□□ 0.53
UPF3A-206ENST00000480362 MAGED2Q9UNF1 606 aaPredicted RBP18.39■□□□□ 0.53
UPF3A-206ENST00000480362 A0A1W2PQH9 124 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 EPOPA6NHQ4 379 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 MIF4GDA9UHW6 222 aaKnown RBP18.38■□□□□ 0.53
UPF3A-206ENST00000480362 DDX3YO15523 660 aaKnown RBP18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CLASP2O75122 1294 aaKnown RBP18.38■□□□□ 0.53
UPF3A-206ENST00000480362 RNF8O76064 485 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CSH1P0DML2 217 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CSH2P0DML3 217 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 NCAM1P13591 858 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 DESP17661 470 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 TFE3P19532 575 aaPredicted RBP18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CTNNA2P26232 953 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 PGFP49763 221 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CLCN4P51793 760 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 EPHB3P54753 998 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 TAS2R40P59535 323 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 ATP11AP98196 1134 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 TAF10Q12962 218 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 VEPH1Q14D04 833 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CDO1Q16878 200 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 BTBD8Q5XKL5 378 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 CCDC149Q6ZUS6 474 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 SLC7A14Q8TBB6 771 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 GDPD5Q8WTR4 605 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 KRT35Q92764 455 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 PSMB7Q99436 277 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 TTLL2Q9BWV7 592 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 NMUR1Q9HB89 426 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 ABCC13Q9NSE7 274 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 EHD2Q9NZN4 543 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 GMIPQ9P107 970 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 STAP1Q9ULZ2 295 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 SAR1BQ9Y6B6 198 aa18.38■□□□□ 0.53
UPF3A-206ENST00000480362 PLXNA3P51805 1871 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms