RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ZWILCHQ9H900 591 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 POPDC2Q9HBU9 364 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 NGRNQ9NPE2 291 aaKnown RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 MED4Q9NPJ6 270 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 CHST7Q9NS84 486 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 RCOR3Q9P2K3 495 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ADAM28Q9UKQ2 775 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 HPCAL4Q9UM19 191 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 NEU2Q9Y3R4 380 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 I3L4J1 428 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 APOC4-APOC2K7ER74 178 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 NRP1O14786 923 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 B4GALT3O60512 393 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 EFCAB14O75071 495 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 GRAP2O75791 330 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 APOC2P02655 101 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ITGB1P05556 798 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ITGAVP06756 1048 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 KRT10P13645 584 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ITIH2P19823 946 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 IBSPP21815 317 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 FGFR3P22607 806 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 MAGEA11P43364 429 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 VCPP55072 806 aaKnown RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 KRT17Q04695 432 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 BYSLQ13895 437 aaKnown RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 IKBKEQ14164 716 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 DPYSL2Q16555 572 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 PAN2Q504Q3 1202 aaKnown RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ERMARDQ5T6L9 678 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 VSTM1Q6UX27 236 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 SPATA2LQ8IUW3 424 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 DEFB106AQ8N104 65 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 SLC35B2Q8TB61 432 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 HASPINQ8TF76 798 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 CLEC4CQ8WTT0 213 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 FMO2Q99518 471 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ULBP1Q9BZM6 244 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 FOXP3Q9BZS1 431 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 C11orf49Q9H6J7 331 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ZDHHC18Q9NUE0 388 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 KLHL11Q9NVR0 708 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 GRHL1Q9NZI5 618 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 MTRF1LQ9UGC7 380 aaKnown RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 PCSK1NQ9UHG2 260 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 R3HDM2Q9Y2K5 976 aaKnown RBP11.5□□□□□ -0.57
VTI1A-204ENST00000480057 USP3Q9Y6I4 520 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 NLRC5Q86WI3 1866 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 MICAL3Q7RTP6 2002 aa11.5□□□□□ -0.57
VTI1A-204ENST00000480057 ABHD14A-ACY1A0A1B0GW23 586 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 H7C4K7 107 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CST8O60676 142 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZNF189O75820 626 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZBED1O96006 694 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 F9P00740 461 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CLTBP09497 229 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 TGM2P21980 687 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 RDXP35241 583 aaKnown RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 KCNJ1P48048 391 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 SLC11A1P49279 550 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 SULT1E1P49888 294 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZNF135P52742 658 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CDH6P55285 790 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ATP11AP98196 1134 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 DPYSL3Q14195 570 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 KRT81Q14533 505 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 OASLQ15646 514 aaKnown RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CDO1Q16878 200 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CCDC142Q17RM4 750 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 TCTN1Q2MV58 587 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 SMTNL2Q2TAL5 461 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 KCNT1Q5JUK3 1230 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 SH3PXD2AQ5TCZ1 1133 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 KAZNQ674X7 775 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZNF280DQ6N043 979 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZDHHC24Q6UX98 284 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CEP128Q6ZU80 1094 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 RFX6Q8HWS3 928 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ALLCQ8N6M5 410 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ATG4AQ8WYN0 398 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 HSPH1Q92598 858 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 ART4Q93070 314 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 NTAN1Q96AB6 310 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 FAM149B1Q96BN6 582 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 SNF8Q96H20 258 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms