RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PIAS3Q9Y6X2 628 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
DDX56-211ENST00000479602 MAP1BP46821 2468 aaKnown RBP9.42□□□□□ -0.9
DDX56-211ENST00000479602 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 PRR5-ARHGAP8B1AHC4 643 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 TEX33O43247 280 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 MED7O43513 233 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 HAPLN1P10915 354 aaPredicted RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 CPB1P15086 417 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 HMGA1P17096 107 aaKnown RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 ATF6P18850 670 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 LMO2P25791 158 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 SOX5P35711 763 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 SCNN1AP37088 669 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 PLA2G4AP47712 749 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 CXCL12P48061 93 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 PPP3CCP48454 512 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 BCAT1P54687 386 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 EPHB3P54753 998 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 NRLP54845 237 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 RPL10AP62906 217 aaKnown RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 ARHGAP8P85298 464 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 ZBED6P86452 979 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 TBX2Q13207 712 aaPredicted RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 SGO2Q562F6 1265 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 HSP90AA4PQ58FG1 418 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 SNX30Q5VWJ9 437 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 TRIM72Q6ZMU5 477 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 PAQR9Q6ZVX9 377 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 BEND5Q7L4P6 421 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 RALGPS2Q86X27 583 aaPredicted RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 ELMOD1Q8N336 334 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 SYNPOQ8N3V7 929 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 ANKRD52Q8NB46 1076 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 OR6B3Q8NGW1 331 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 EPS8L1Q8TE68 723 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 KCTD13Q8WZ19 329 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 MYLPFQ96A32 169 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 PGLYRP2Q96PD5 576 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 CRACR2AQ9BSW2 395 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 LSM14BQ9BX40 385 aaKnown RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 ZNF518BQ9C0D4 1074 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 MMRN2Q9H8L6 949 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 UBE2TQ9NPD8 197 aaPredicted RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 IFNKQ9P0W0 207 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDX56-211ENST00000479602 SMG5Q9UPR3 1016 aaKnown RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 BZW2Q9Y6E2 419 aaKnown RBP9.41□□□□□ -0.9
DDX56-211ENST00000479602 MIA3Q5JRA6 1907 aa9.41□□□□□ -0.9
DDX56-211ENST00000479602 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 EPHB6O15197 1021 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 LRP3O75074 770 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 SOAT2O75908 522 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 PRAMEF12O95522 483 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 F11P03951 625 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 GYPCP04921 128 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 RETP07949 1114 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CSH1P0DML2 217 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CSH2P0DML3 217 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 FERP16591 822 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 HOXC13P31276 330 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CNR2P34972 360 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CLCN1P35523 988 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 STAT1P42224 750 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 ALDH1A3P47895 512 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 TUBP50607 506 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CCR3P51677 355 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CDH8P55286 799 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 SATB1Q01826 763 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 PTK2Q05397 1052 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 DMWDQ09019 674 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 DRAP1Q14919 205 aaPredicted RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 SLC39A12Q504Y0 691 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 RAB41Q5JT25 222 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 DGKKQ5KSL6 1271 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 TMEM270Q6UE05 265 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 ARCQ7LC44 396 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 ITIH5Q86UX2 942 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CNGA4Q8IV77 575 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 DDX1Q92499 740 aaKnown RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 DUSP16Q9BY84 665 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 TASP1Q9H6P5 420 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 FAM207AQ9NSI2 230 aaPredicted RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 UXTQ9UBK9 157 aaPredicted RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 HMGXB4Q9UGU5 601 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 NOCTQ9UK39 431 aaKnown RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 NDRG2Q9UN36 371 aaKnown RBP9.4□□□□□ -0.9
DDX56-211ENST00000479602 USP3Q9Y6I4 520 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 DENND4CQ5VZ89 1909 aa9.4□□□□□ -0.9
DDX56-211ENST00000479602 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 OBSL1O75147 1896 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SSU72P8A0A1W2PR75 194 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 OTOL1A6NHN0 477 aaPredicted RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 SPECC1L-ADORA2AF8WAN1 911 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms