RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 STX6O43752 255 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 TRIM16O95361 564 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 ABL1P00519 1130 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 SERPINF2P08697 491 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 MYL6P60660 151 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 ASIC1P78348 528 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 STK38Q15208 465 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 KNOP1Q1ED39 458 aaKnown RBP14.1□□□□□ -0.15
ABCF1-206ENST00000479542 EMC10Q5UCC4 262 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 LYSMD4Q5XG99 296 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 KLHDC10Q6PID8 442 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 UNC93AQ86WB7 457 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 SLC9A9Q8IVB4 645 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 TERB1Q8NA31 727 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 RDH13Q8NBN7 331 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 PARD3BQ8TEW8 1205 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 TAF4BQ92750 862 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 GATA6Q92908 595 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 ZNF396Q96N95 335 aaPredicted RBP14.1□□□□□ -0.15
ABCF1-206ENST00000479542 ADAM33Q9BZ11 813 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 DPEP3Q9H4B8 488 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 CD248Q9HCU0 757 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 DMAP1Q9NPF5 467 aaPredicted RBP14.1□□□□□ -0.15
ABCF1-206ENST00000479542 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 MARK1Q9P0L2 795 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 MBD1Q9UIS9 605 aaPredicted RBP14.1□□□□□ -0.15
ABCF1-206ENST00000479542 SLC6A14Q9UN76 642 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 SH3BP1Q9Y3L3 701 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 NEUROG3Q9Y4Z2 214 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 TNRC6BQ9UPQ9 1833 aaKnown RBP14.1□□□□□ -0.15
ABCF1-206ENST00000479542 GON4LQ3T8J9 2241 aa14.1□□□□□ -0.15
ABCF1-206ENST00000479542 FRYQ5TBA9 3013 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 ANTXRLA6NF34 631 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 TULP1O00294 542 aaPredicted RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 CUTAO60888 179 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 TULP3O75386 442 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 C4BPAP04003 597 aaKnown RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 RPN1P04843 607 aaKnown RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 ENGP17813 658 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 NTSR1P30989 418 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 ZNF132P52740 706 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 SLC5A3P53794 718 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 SLC14A1Q13336 389 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 ZNF667Q5HYK9 610 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 METTL3Q86U44 580 aaKnown RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 FAM35AQ86V20 835 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 ZNF513Q8N8E2 541 aaPredicted RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 HPS3Q969F9 1004 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 CCDC127Q96BQ5 260 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 KCNK16Q96T55 309 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 CAPN10Q9HC96 672 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 PNPLA8Q9NP80 782 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 CYLDQ9NQC7 956 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 TMEM74BQ9NUR3 256 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 DMAC2Q9NW81 257 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 BCCIPQ9P287 314 aaKnown RBP eCLIP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 WDR35Q9P2L0 1181 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 TFIP11Q9UBB9 837 aaKnown RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 CHORDC1Q9UHD1 332 aaPredicted RBP14.09□□□□□ -0.15
ABCF1-206ENST00000479542 ZMIZ1Q9ULJ6 1067 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 MSRB2Q9Y3D2 182 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 NFE2L3Q9Y4A8 694 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 MYOFQ9NZM1 2061 aa14.09□□□□□ -0.15
ABCF1-206ENST00000479542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 A0A1W2PQD8 194 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 A0A1W2PQF6 199 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 C1QTNF9BB2RNN3 333 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 CLDN5O00501 218 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 IKBKBO14920 756 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 NPC1O15118 1278 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 CLIC2O15247 247 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 CACNG3O60359 315 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 GREM1O60565 184 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 C1QTNF9P0C862 333 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 P4HA1P13674 534 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 RDXP35241 583 aaKnown RBP14.08□□□□□ -0.16
ABCF1-206ENST00000479542 PTGER3P43115 390 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 SGSM1Q2NKQ1 1148 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 ATL3Q6DD88 541 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 SFTPA1Q8IWL2 248 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 TMEFF1Q8IYR6 380 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 FUKQ8N0W3 1084 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 SCAMP5Q8TAC9 235 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 HMGB4Q8WW32 186 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 RLN3Q8WXF3 142 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 SNX21Q969T3 373 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 ZNF419Q96HQ0 510 aaPredicted RBP14.08□□□□□ -0.16
ABCF1-206ENST00000479542 XPO6Q96QU8 1125 aaKnown RBP14.08□□□□□ -0.16
ABCF1-206ENST00000479542 GABRG3Q99928 467 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 SCNM1Q9BWG6 230 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 TLR8Q9NR97 1041 aaKnown RBP14.08□□□□□ -0.16
ABCF1-206ENST00000479542 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
ABCF1-206ENST00000479542 NXF1Q9UBU9 619 aaKnown RBP14.08□□□□□ -0.16
ABCF1-206ENST00000479542 FBXO10Q9UK96 956 aa14.08□□□□□ -0.16
ABCF1-206ENST00000479542 TCRBV21S2A2A0A5A6 115 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 ZBTB24O43167 697 aaPredicted RBP14.07□□□□□ -0.16
ABCF1-206ENST00000479542 TLR5O60602 858 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 EXOC3O60645 756 aa14.07□□□□□ -0.16
ABCF1-206ENST00000479542 PHACTR2O75167 634 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms