RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 NUP107P57740 925 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 CCDC92Q53HC0 331 aaPredicted RBP20.24■□□□□ 0.83
ABCA2-217ENST00000479446 FAM131BQ86XD5 332 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 USP13Q92995 863 aaPredicted RBP20.24■□□□□ 0.83
ABCA2-217ENST00000479446 PDCD2LQ9BRP1 358 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 NCKIPSDQ9NZQ3 722 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 SNX13Q9Y5W8 968 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 CCL15-CCL14A0A0B4J2E2 113 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 RBP1P09455 135 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 CCDC159P0C7I6 412 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 MPP3Q13368 585 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 CCL15Q16663 113 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 YAF2Q8IY57 180 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 HS6ST3Q8IZP7 471 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 FBXO21O94952 628 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 PXMP2Q9NR77 195 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 H2AFY2Q9P0M6 372 aaPredicted RBP20.24■□□□□ 0.83
ABCA2-217ENST00000479446 DNALI1O14645 258 aaPredicted RBP20.24■□□□□ 0.83
ABCA2-217ENST00000479446 TATDN2Q93075 761 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 VCPIP1Q96JH7 1222 aa20.24■□□□□ 0.83
ABCA2-217ENST00000479446 RPL21P46778 160 aaKnown RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 SLC11A2P49281 568 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 SLC26A2P50443 739 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 PEX5P50542 639 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 A0A087X0B3 334 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ATP6V1G2O95670 118 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 BACE1P56817 501 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 CHRNB3Q05901 458 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 PPP4R4Q6NUP7 873 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 GPR141Q7Z602 305 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 SYTL5Q8TDW5 730 aaPredicted RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 GDF3Q9NR23 364 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 IL17RBQ9NRM6 502 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 PCDHA3Q9Y5H8 950 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 SALL1Q9NSC2 1324 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ZCCHC18P0CG32 403 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ZNF23P17027 643 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 UBE3AQ05086 875 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 NT5DC3Q86UY8 548 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 CCDC33Q8N5R6 958 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ABHD8Q96I13 439 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 B3GAT3O94766 335 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 FAM153BP0C7A2 387 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 RAP1GAPP47736 663 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 RPL10AP62906 217 aaKnown RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 GCNT1Q02742 428 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 FAM153CQ494X1 144 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ZKSCAN4Q969J2 545 aaPredicted RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 FAM153AQ9UHL3 310 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 PRG3Q9Y2Y8 225 aaPredicted RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 C17orf102A2RUQ5 167 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 DDX3XO00571 662 aaKnown RBP eCLIP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 NFIBO00712 420 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 SERPINB1P30740 379 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 CSTF3Q12996 717 aaKnown RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ZNF177Q13360 481 aaPredicted RBP20.23■□□□□ 0.83
ABCA2-217ENST00000479446 BMPR2Q13873 1038 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 PHF21AQ96BD5 680 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ANKRD27Q96NW4 1050 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 ZCWPW1Q9H0M4 648 aa20.23■□□□□ 0.83
ABCA2-217ENST00000479446 LRRC10BA6NIK2 292 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 FUT11Q495W5 492 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 ZFYVE19Q96K21 471 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 E9PBE3 544 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 KLHL41O60662 606 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 PYGMP11217 842 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 CREG2Q8IUH2 290 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 ADGRF2Q8IZF7 708 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 CYB561D2O14569 222 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 KLHL4Q9C0H6 718 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 DDTLA6NHG4 134 aaPredicted RBP20.22■□□□□ 0.83
ABCA2-217ENST00000479446 KBTBD13C9JR72 458 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 ALDH1A3P47895 512 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 WASHC5Q12768 1159 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 ZNF606Q8WXB4 792 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 MPP6Q9NZW5 540 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 JCHAINP01591 159 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 SOAT1P35610 550 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 RARRES1P49788 294 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 CASP7P55210 303 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 PDPK2PQ6A1A2 396 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 PGM2Q96G03 612 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 TBCBQ99426 244 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 SPATA16Q9BXB7 569 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 SPASTQ9UBP0 616 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 CLCA2Q9UQC9 943 aa20.22■□□□□ 0.83
ABCA2-217ENST00000479446 RARAP10276 462 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 HIST2H2ACQ16777 129 aaPredicted RBP20.21■□□□□ 0.83
ABCA2-217ENST00000479446 WASHC2DQ5SRD0 308 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 HIST2H2AA3Q6FI13 130 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 CCDC81Q6ZN84 652 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 APOL2Q9BQE5 337 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 KIAA1210Q9ULL0 1709 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 NCAM2O15394 837 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 SASH3O75995 380 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 BLVRAP53004 296 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 CYP4F12Q9HCS2 524 aa20.21■□□□□ 0.83
ABCA2-217ENST00000479446 NUDT12Q9BQG2 462 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms