RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CDK7P50613 346 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 SCNN1GP51170 649 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ARSEP51690 589 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 CLCNKBP51801 687 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 YWHAZP63104 245 aaKnown RBP8.29□□□□□ -1.08
VMA21-203ENST00000477649 MRPS5P82675 430 aaKnown RBP8.29□□□□□ -1.08
VMA21-203ENST00000477649 TSPY1Q01534 308 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ADCY2Q08462 1091 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 CBLBQ13191 982 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 XRCC4Q13426 336 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 KRT81Q14533 505 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 OASLQ15646 514 aaKnown RBP8.29□□□□□ -1.08
VMA21-203ENST00000477649 DPYSL2Q16555 572 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 SLC25A52Q3SY17 297 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ERMARDQ5T6L9 678 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 FAM171BQ6P995 826 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 RHBDF2Q6PJF5 856 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 C4orf50Q6ZRC1 276 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 PIGZQ86VD9 579 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 DDX42Q86XP3 938 aaKnown RBP eCLIP8.29□□□□□ -1.08
VMA21-203ENST00000477649 SCUBE3Q8IX30 993 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 FUKQ8N0W3 1084 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 SIX6OS1Q8N1H7 587 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ARFGAP1Q8N6T3 406 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 EMC1Q8N766 993 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 PPP1R13LQ8WUF5 828 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 FAM172AQ8WUF8 416 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
VMA21-203ENST00000477649 FAF2Q96CS3 445 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 GDAP1L1Q96MZ0 367 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 TTC25Q96NG3 672 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 RNF157Q96PX1 679 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 FERMT1Q9BQL6 677 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 MED10Q9BTT4 135 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
VMA21-203ENST00000477649 HEMGNQ9BXL5 484 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 TRIM31Q9BZY9 425 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.08
VMA21-203ENST00000477649 CXCL16Q9H2A7 254 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 DPEP3Q9H4B8 488 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ZWILCHQ9H900 591 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 CSNK1G1Q9HCP0 422 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 TRMT13Q9NUP7 481 aaKnown RBP8.29□□□□□ -1.08
VMA21-203ENST00000477649 TMEM161AQ9NX61 479 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 VPS18Q9P253 973 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ANAPC5Q9UJX4 755 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ADAM21Q9UKJ8 722 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 SHOC2Q9UQ13 582 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 PLAAQ9Y263 795 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 PTPN22Q9Y2R2 807 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 NME7Q9Y5B8 376 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 SF3B1O75533 1304 aaKnown RBP eCLIP8.29□□□□□ -1.08
VMA21-203ENST00000477649 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 FAM170AA1A519 330 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 SRRM3A6NNA2 597 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 DNALI1O14645 258 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 SYN3O14994 580 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 POLR3GO15318 223 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 CST8O60676 142 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 IVLP07476 585 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 CCDC130P13994 396 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 TSHRP16473 764 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 IVDP26440 423 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 IL1R2P27930 398 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 ACTN2P35609 894 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 KCNJ1P48048 391 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 VEGFBP49765 207 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 RGS7P49802 495 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 CDH6P55285 790 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 IFFO1Q0D2I5 559 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 SMARCB1Q12824 385 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 ELAVL2Q12926 359 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 SNX1Q13596 522 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 TRADDQ15628 312 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 NOMO2Q5JPE7 1267 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 RAB41Q5JT25 222 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 KAZNQ674X7 775 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 PPP1R21Q6ZMI0 780 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 CLEC20AQ6ZU45 233 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 PDZD4Q76G19 769 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 LRRC8DQ7L1W4 858 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 FAM35AQ86V20 835 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 RFX6Q8HWS3 928 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 DCP1BQ8IZD4 617 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 ZCCHC9Q8N567 271 aaKnown RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 RSAD2Q8WXG1 361 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 PIK3R5Q8WYR1 880 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 SEPT8Q92599 483 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 P3H4Q92791 437 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 NT5C3BQ969T7 300 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 PGAP3Q96FM1 320 aaPredicted RBP8.28□□□□□ -1.08
VMA21-203ENST00000477649 PGM2Q96G03 612 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 FUBP3Q96I24 572 aaKnown RBP eCLIP8.28□□□□□ -1.08
VMA21-203ENST00000477649 ATP6V1G3Q96LB4 118 aa8.28□□□□□ -1.08
VMA21-203ENST00000477649 SLC2A13Q96QE2 648 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms