RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 TTYH3Q9C0H2 523 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 MIS12Q9H081 205 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 OBSL1O75147 1896 aa13.8□□□□□ -0.2
TOP3A-205ENST00000477508 NUP210Q8TEM1 1887 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 DCXO43602 365 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 TLR5O60602 858 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 OLFM2O95897 454 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 ASGR2P07307 311 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 TCF3P15923 654 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 PSMC3P17980 439 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 FCARP24071 287 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 CDH5P33151 784 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 ATP5C1P36542 298 aaKnown RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 RGS7P49802 495 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 SLC7A9P82251 487 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 PDCLQ13371 301 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 TRIM14Q14142 442 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 SPECC1LQ69YQ0 1117 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 POTEHQ6S545 545 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 NOP9Q86U38 636 aaKnown RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 DDX1Q92499 740 aaKnown RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 BAP1Q92560 729 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 GOLGA1Q92805 767 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 PPP1R13BQ96KQ4 1090 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 TRMT61BQ9BVS5 477 aaKnown RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 NACA2Q9H009 215 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 THG1LQ9NWX6 298 aaKnown RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 AIPL1Q9NZN9 384 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 NAGPAQ9UK23 515 aa13.79□□□□□ -0.2
TOP3A-205ENST00000477508 NOCTQ9UK39 431 aaKnown RBP13.79□□□□□ -0.2
TOP3A-205ENST00000477508 A0A1W2PQH9 124 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 C2orf78A6NCI8 922 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 HEPACAM2A8MVW5 462 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 TPM1P09493 284 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 SRFP11831 508 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 RARGP13631 454 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 LCP1P13796 627 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 VIPR2P41587 438 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 DAOAP59103 153 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 ZBED6P86452 979 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 PFKPQ01813 784 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 ARID5AQ03989 594 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 GOLGA8FQ08AF8 430 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 GOLGA8DPQ0D2H9 430 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 FCHO2Q0JRZ9 810 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 ASIC2Q16515 512 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 SCD5Q86SK9 330 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 ZDHHC17Q8IUH5 632 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 WDTC1Q8N5D0 677 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 IPO4Q8TEX9 1081 aaKnown RBP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 RSAD2Q8WXG1 361 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 SYN2Q92777 582 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 CYP2S1Q96SQ9 504 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 KXD1Q9BQD3 176 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 SYNCQ9H7C4 482 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 SLC2A4RGQ9NR83 387 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 ABCC13Q9NSE7 274 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 OLA1Q9NTK5 396 aaKnown RBP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 MUTYHQ9UIF7 546 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 DNMT3LQ9UJW3 386 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 CAPN11Q9UMQ6 739 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 DUSP12Q9UNI6 340 aa13.78□□□□□ -0.2
TOP3A-205ENST00000477508 LUC7L2Q9Y383 392 aaKnown RBP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
TOP3A-205ENST00000477508 LRRC53A6NM62 1247 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 COCHO43405 550 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 PRAMEF12O95522 483 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 GLI1P08151 1106 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 MMEP08473 750 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 CFHP08603 1231 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 ARHGAP29Q52LW3 1261 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 BSPRYQ5W0U4 402 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 BTBD8Q5XKL5 378 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 PPP1R2P3Q6NXS1 205 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 VITQ6UXI7 678 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 RSRC2Q7L4I2 434 aaKnown RBP13.77□□□□□ -0.21
TOP3A-205ENST00000477508 BEND5Q7L4P6 421 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 IRF2BP2Q7Z5L9 587 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 SCUBE3Q8IX30 993 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.21
TOP3A-205ENST00000477508 RNF139Q8WU17 664 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 EDAQ92838 391 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 IRF7Q92985 503 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 SLC22A12Q96S37 553 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 TRIM5Q9C035 493 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 RNF38Q9H0F5 515 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms