RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 USP6NLQ92738 828 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 ARHGEF2Q92974 986 aaKnown RBP7.99□□□□□ -1.13
CCDC171-205ENST00000472806 HAUS1Q96CS2 278 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 ZNF668Q96K58 619 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-205ENST00000472806 CABS1Q96KC9 395 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 SNX27Q96L92 541 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 CPXM1Q96SM3 734 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 RBM15Q96T37 977 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCDC171-205ENST00000472806 TBCBQ99426 244 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 ELOVL4Q9GZR5 314 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 AP5M1Q9H0R1 490 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 SDCBP2Q9H190 292 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 R3HDMLQ9H3Y0 253 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 ZWILCHQ9H900 591 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 ACTR5Q9H9F9 607 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-205ENST00000472806 PRDM16Q9HAZ2 1276 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 NKIRAS1Q9NYS0 192 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 NINJ2Q9NZG7 142 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 SAMD15Q9P1V8 674 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 LGALS13Q9UHV8 139 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 DNPEPQ9ULA0 475 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 Q9Y3F1 56 aa7.99□□□□□ -1.13
CCDC171-205ENST00000472806 ANK1P16157 1881 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 A6NJR5 290 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 SMIM23A6NLE4 172 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 PRPSAP2O60256 369 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CST8O60676 142 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 KPNA6O60684 536 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 GJB6O95452 261 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 TRUB2O95900 331 aaKnown RBP7.98□□□□□ -1.13
CCDC171-205ENST00000472806 F2P00734 622 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 RPLP2P05387 115 aaKnown RBP7.98□□□□□ -1.13
CCDC171-205ENST00000472806 IQCF3P0C7M6 154 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CYP2C9P11712 490 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 KRT10P13645 584 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 DARSP14868 501 aaKnown RBP7.98□□□□□ -1.13
CCDC171-205ENST00000472806 ZFXP17010 805 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CYP3A5P20815 502 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 TGM2P21980 687 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 GBP2P32456 591 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CHKAP35790 457 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 VPS41P49754 854 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CDH8P55286 799 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 SLC8A3P57103 927 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 KRT81Q14533 505 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 LLGL1Q15334 1064 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 GPR162Q16538 588 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 KYNUQ16719 465 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 GOLGA7BQ2TAP0 167 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 SV2CQ496J9 727 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 ARHGAP17Q68EM7 881 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 FOXR1Q6PIV2 292 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CCDC121Q6ZUS5 278 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 LYSMD3Q7Z3D4 306 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 ANKS1BQ7Z6G8 1248 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 TDRPQ86YL5 185 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 HACE1Q8IYU2 909 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CCDC197Q8NCU1 140 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 HERPUD2Q9BSE4 406 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 ADAMTS10Q9H324 1103 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 SAYSD1Q9NPB0 183 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 KLHL11Q9NVR0 708 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 FETUBQ9UGM5 382 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 SLC24A2Q9UI40 661 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 TSPAN16Q9UKR8 245 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 USP18Q9UMW8 372 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 RALGAPA2Q2PPJ7 1873 aa7.98□□□□□ -1.13
CCDC171-205ENST00000472806 MCM3APO60318 1980 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 EXOC1LA0A1B0GW35 172 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 MBLAC1A4D2B0 266 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 MANSC4A6NHS7 340 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 C3orf70A6NLC5 250 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ALOX15BO15296 676 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 DYNC1LI2O43237 492 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SPAG6O75602 509 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 IFNB1P01574 187 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SMIM10L2AP0DMW4 78 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SMIM10L2BP0DMW5 78 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 PDGFRAP16234 1089 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 MIPP30301 263 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SDC4P31431 198 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SEC24CP53992 1094 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 BCAT1P54687 386 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 EIF3EP60228 445 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 OTUD4Q01804 1114 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SLC6A3Q01959 620 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ROR1Q01973 937 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ITIH4Q14624 930 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 HIF1AQ16665 826 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 KLHL38Q2WGJ6 581 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ATP13A4Q4VNC1 1196 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 MARCH8Q5T0T0 291 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 GJC2Q5T442 439 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 RNASEH2BQ5TBB1 312 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 DAB2IPQ5VWQ8 1189 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 DPH6Q7L8W6 267 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms