RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 FBXO21O94952 628 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 TPM3P06753 285 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 CCDC172P0C7W6 258 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 MBL2P11226 248 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-211ENST00000472490 GLULP15104 373 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 CLCN1P35523 988 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 STAT1P42224 750 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 GPD2P43304 727 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 MLLT6P55198 1093 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-211ENST00000472490 YWHAGP61981 247 aaKnown RBP eCLIP14.93□□□□□ -0.02
BRCA1-211ENST00000472490 PRKCQQ04759 706 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 ADIGQ0VDE8 80 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 MTF1Q14872 753 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 PDGFRLQ15198 375 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 SLC44A4Q53GD3 710 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 CACNA2D4Q7Z3S7 1137 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 SLC47A2Q86VL8 602 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 GPIHBP1Q8IV16 184 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 SUGP1Q8IWZ8 645 aaKnown RBP14.93□□□□□ -0.02
BRCA1-211ENST00000472490 TTC16Q8NEE8 873 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 SH3RF2Q8TEC5 729 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 IRGQQ8WZA9 623 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 MSANTD3Q96H12 275 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 SLC22A12Q96S37 553 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 ZSWIM1Q9BR11 485 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 TRIM62Q9BVG3 475 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 RNF38Q9H0F5 515 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 GANQ9H2C0 597 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 LHX5Q9H2C1 402 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 ST7Q9NRC1 585 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 DNMT3LQ9UJW3 386 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-211ENST00000472490 CA14Q9ULX7 337 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 CCL26Q9Y258 94 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 CPQQ9Y646 472 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 NOTCH4Q99466 2003 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 A0A1B0GTH6 734 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 A0A1W2PQH9 124 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 TULP2O00295 520 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 STK25O00506 426 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 SLC9A3R1O14745 358 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-211ENST00000472490 RARGP13631 454 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 LCP1P13796 627 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 CYP11B1P15538 503 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 SOX5P35711 763 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 KLK7P49862 253 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 AMPD2Q01433 879 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 ZNF77Q15935 545 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 PMF1Q6P1K2 205 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 RSRC2Q7L4I2 434 aaKnown RBP14.92□□□□□ -0.02
BRCA1-211ENST00000472490 ZNF677Q86XU0 584 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 RSPRY1Q96DX4 576 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 ULBP1Q9BZM6 244 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 CCSER2Q9H7U1 834 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 ACP6Q9NPH0 428 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 NLRC4Q9NPP4 1024 aa14.92□□□□□ -0.02
BRCA1-211ENST00000472490 OLA1Q9NTK5 396 aaKnown RBP14.92□□□□□ -0.02
BRCA1-211ENST00000472490 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.92□□□□□ -0.02
BRCA1-211ENST00000472490 FAM86C2PA6NEL3 165 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 LEFTY2O00292 366 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 MAN2B1O00754 1011 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 CALCAP01258 141 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 IFNAR2P48551 515 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 RGS7P49802 495 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 KPNA1P52294 538 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-211ENST00000472490 UBASH3AP57075 661 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 JAM2P57087 298 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 FANCCQ00597 558 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 USP4Q13107 963 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 MLF2Q15773 248 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-211ENST00000472490 C10orf120Q5SQS8 335 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 BTBD8Q5XKL5 378 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 TMEM35BQ8NCS4 154 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 RNF139Q8WU17 664 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 OSCP1Q8WVF1 389 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 ATP2A3Q93084 1043 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 EXOC4Q96A65 974 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 LRRC3BQ96PB8 259 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 NELL2Q99435 816 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 C8orf33Q9H7E9 229 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-211ENST00000472490 GKN1Q9NS71 199 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 ABCC13Q9NSE7 274 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 DUS2Q9NX74 493 aaKnown RBP14.91□□□□□ -0.02
BRCA1-211ENST00000472490 SMPD4Q9NXE4 827 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 TBC1D14Q9P2M4 693 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 MRPS17Q9Y2R5 130 aaKnown RBP14.91□□□□□ -0.02
BRCA1-211ENST00000472490 SH3BP1Q9Y3L3 701 aa14.91□□□□□ -0.02
BRCA1-211ENST00000472490 PTPRDP23468 1912 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 E2F8A0AVK6 867 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 ARNTLO00327 626 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 EPHB6O15197 1021 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 TEX33O43247 280 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 GFPT2O94808 682 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 LSM8O95777 96 aaKnown RBP14.9□□□□□ -0.02
BRCA1-211ENST00000472490 PNMA6AP0CW24 399 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-211ENST00000472490 RPL34P49207 117 aaKnown RBP14.9□□□□□ -0.02
BRCA1-211ENST00000472490 CLCN5P51795 746 aa14.9□□□□□ -0.02
BRCA1-211ENST00000472490 STARD6P59095 220 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms