RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 HELZ2Q9BYK8 2649 aaKnown RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 APC2O95996 2303 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 ACACAQ13085 2346 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 A0A1W2PQF6 199 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 ZNF840PA6NDX5 716 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 TK2O00142 265 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 TRIM66O15016 1216 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 ARHGAP6O43182 974 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 TNFSF14O43557 240 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SYNCRIPO60506 623 aaKnown RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 IL18RAPO95256 599 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 KRT10P13645 584 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 LMO2P25791 158 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 DDIT3P35638 169 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 LHX1P48742 406 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SLC12A3P55017 1021 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SLC7A9P82251 487 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 MYO1EQ12965 1108 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 IL17AQ16552 155 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 CFAP221Q4G0U5 840 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 ARSHQ5FYA8 562 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SCARA3Q6AZY7 606 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SLFN12LQ6IEE8 588 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 GPR155Q7Z3F1 870 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 GLRX5Q86SX6 157 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 BBS7Q8IWZ6 715 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 C4orf32Q8N8J7 132 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 CACTINQ8WUQ7 758 aaKnown RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 BAP1Q92560 729 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 ZNF419Q96HQ0 510 aaPredicted RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 FUBP3Q96I24 572 aaKnown RBP eCLIP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 XPO6Q96QU8 1125 aaKnown RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 MED10Q9BTT4 135 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 MMTAG2Q9BU76 263 aaKnown RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SNX25Q9H3E2 840 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 CLMPQ9H6B4 373 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 SPHK2Q9NRA0 654 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 TOR4AQ9NXH8 423 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 RBAKQ9NYW8 714 aaPredicted RBP7.32□□□□□ -1.24
HDAC1-204ENST00000471488 PLK2Q9NYY3 685 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 TBC1D7Q9P0N9 293 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 GMIPQ9P107 970 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 MYOFQ9NZM1 2061 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 ASXL3Q9C0F0 2248 aa7.32□□□□□ -1.24
HDAC1-204ENST00000471488 E2F8A0AVK6 867 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 CBX4O00257 560 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 COCHO43405 550 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 TLX3O43711 291 aaPredicted RBP7.31□□□□□ -1.24
HDAC1-204ENST00000471488 ADRB2P07550 413 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 TYRP14679 529 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 TCF3P15923 654 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 YWHAQP27348 245 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 GRK6P43250 576 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 DGKGP49619 791 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 NEK4P51957 841 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 RBP5P82980 135 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 KCNC4Q03721 635 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 ARID5AQ03989 594 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 MCM6Q14566 821 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 TEAD4Q15561 434 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 MAPRE1Q15691 268 aaKnown RBP7.31□□□□□ -1.24
HDAC1-204ENST00000471488 SOWAHAQ2M3V2 549 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 FUT11Q495W5 492 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PRAMEF14Q5SWL7 426 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 VSTM1Q6UX27 236 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 SYCP3Q8IZU3 236 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PHTF2Q8N3S3 785 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 FAM181AQ8N9Y4 354 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 OR6B3Q8NGW1 331 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PRCCQ92733 491 aaPredicted RBP7.31□□□□□ -1.24
HDAC1-204ENST00000471488 SIPA1Q96FS4 1042 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 CALML4Q96GE6 196 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PCED1BQ96HM7 432 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
HDAC1-204ENST00000471488 LGMNQ99538 433 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 MTMR12Q9C0I1 747 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 CCSER1Q9C0I3 900 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PCIF1Q9H4Z3 704 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PRORYQ9H606 182 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 CCSER2Q9H7U1 834 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 DKK4Q9UBT3 224 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 CDH9Q9ULB4 789 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 ODF2LQ9ULJ1 636 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 ANAPC1Q9H1A4 1944 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PLXND1Q9Y4D7 1925 aa7.31□□□□□ -1.24
HDAC1-204ENST00000471488 PTPRJQ12913 1337 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 GOLGA4Q13439 2230 aaKnown RBP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 FAM47DPA6NHR8 397 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PRRT4C9JH25 899 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 CLDN5O00501 218 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PRPF6O94906 941 aaKnown RBP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 FSBPO95073 299 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 OAS1P00973 400 aaKnown RBP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PIGRP01833 764 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms