RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CD101Q93033 1021 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 PNPLA8Q9NP80 782 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 FRYLO94915 3013 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 CHURC1-FNTBB4DL54 471 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 TLR5O60602 858 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 FNTBP49356 437 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 KIF11P52732 1056 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 DHCR24Q15392 516 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 ARHGAP17Q68EM7 881 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 DCLK2Q8N568 766 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 KIAA1958Q8N8K9 716 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 EPC1Q9H2F5 836 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 TLR8Q9NR97 1041 aaKnown RBP22.98■■□□□ 1.27
LIME1-203ENST00000465591 EML5Q05BV3 1969 aa22.98■■□□□ 1.27
LIME1-203ENST00000465591 SDK1Q7Z5N4 2213 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 A0A1W2PQH9 124 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 DRD1P21728 446 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 MESP2Q0VG99 397 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 NR1H3Q13133 447 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 PAK1Q13153 545 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 PPP2R5DQ14738 602 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 HEATR6Q6AI08 1181 aaKnown RBP22.97■■□□□ 1.27
LIME1-203ENST00000465591 RHBDF2Q6PJF5 856 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 SCD5Q86SK9 330 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 TTC30AQ86WT1 665 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 DDX42Q86XP3 938 aaKnown RBP eCLIP22.97■■□□□ 1.27
LIME1-203ENST00000465591 TTC39CQ8N584 583 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 LMO3Q8TAP4 145 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 KAT5Q92993 513 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 MED15Q96RN5 788 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 CYLDQ9NQC7 956 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 KIAA1468Q9P260 1216 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 NUDT5Q9UKK9 219 aa22.97■■□□□ 1.27
LIME1-203ENST00000465591 MYO18AQ92614 2054 aaKnown RBP22.97■■□□□ 1.27
LIME1-203ENST00000465591 E2F8A0AVK6 867 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 BICDL2A1A5D9 508 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 MDM4O15151 490 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 PMM2O15305 246 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 IRF1P10914 325 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 NRLP54845 237 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 SRSF5Q13243 272 aaKnown RBP22.96■■□□□ 1.27
LIME1-203ENST00000465591 C12orf40Q86WS4 652 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 SFTPA1Q8IWL2 248 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 TRIM59Q8IWR1 403 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 BBS7Q8IWZ6 715 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 KLF16Q9BXK1 252 aaPredicted RBP22.96■■□□□ 1.27
LIME1-203ENST00000465591 FAM124BQ9H5Z6 455 aaPredicted RBP22.96■■□□□ 1.27
LIME1-203ENST00000465591 SMG5Q9UPR3 1016 aaKnown RBP22.96■■□□□ 1.27
LIME1-203ENST00000465591 USP3Q9Y6I4 520 aa22.96■■□□□ 1.27
LIME1-203ENST00000465591 TULP2O00295 520 aa22.95■■□□□ 1.26
LIME1-203ENST00000465591 SLC9A3R1O14745 358 aaPredicted RBP22.95■■□□□ 1.26
LIME1-203ENST00000465591 GREM1O60565 184 aa22.95■■□□□ 1.26
LIME1-203ENST00000465591 SLC6A11P48066 632 aa22.95■■□□□ 1.26
LIME1-203ENST00000465591 PIGZQ86VD9 579 aa22.95■■□□□ 1.26
LIME1-203ENST00000465591 CEP250Q9BV73 2442 aa22.95■■□□□ 1.26
LIME1-203ENST00000465591 SRRTQ9BXP5 876 aaKnown RBP22.95■■□□□ 1.26
LIME1-203ENST00000465591 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.95■■□□□ 1.262e-6■■□□□ 11.6
LIME1-203ENST00000465591 SPAG17Q6Q759 2223 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 HRO43593 1189 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 RARGP13631 454 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 PXNP49023 591 aaPredicted RBP22.94■■□□□ 1.26
LIME1-203ENST00000465591 GOLGA7BQ2TAP0 167 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 LY6G5CQ5SRR4 150 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 CCDC186Q7Z3E2 898 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 TRIML1Q8N9V2 468 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 ANKRD52Q8NB46 1076 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 RPLP0P6Q8NHW5 317 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 RUBCNQ92622 972 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 DNAI2Q9GZS0 605 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 NACA2Q9H009 215 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 TBC1D14Q9P2M4 693 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 TSPAN16Q9UKR8 245 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 SH3BP1Q9Y3L3 701 aa22.94■■□□□ 1.26
LIME1-203ENST00000465591 K7EQS6 105 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 HOXA6P31267 233 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 MARSP56192 900 aaKnown RBP22.93■■□□□ 1.26
LIME1-203ENST00000465591 KCNH2Q12809 1159 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 LPAL2Q16609 132 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 FBXO43Q4G163 708 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 RAB41Q5JT25 222 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 ARHGEF19Q8IW93 802 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 NT5C1BQ96P26 610 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 NAGPAQ9UK23 515 aa22.93■■□□□ 1.26
LIME1-203ENST00000465591 RNF225M0QZC1 329 aaPredicted RBP22.92■■□□□ 1.26
LIME1-203ENST00000465591 CALCAP01258 141 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 CHRM1P11229 460 aaPredicted RBP22.92■■□□□ 1.26
LIME1-203ENST00000465591 ADH5P11766 374 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 CD19P15391 556 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 TBXAS1P24557 533 aaPredicted RBP22.92■■□□□ 1.26
LIME1-203ENST00000465591 ATP5C1P36542 298 aaKnown RBP22.92■■□□□ 1.26
LIME1-203ENST00000465591 PDE4CQ08493 712 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 SGO2Q562F6 1265 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 LONP2Q86WA8 852 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 TFAP2BQ92481 460 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 HINFPQ9BQA5 517 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 ZSWIM1Q9BR11 485 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 UBXN6Q9BZV1 441 aa22.92■■□□□ 1.26
LIME1-203ENST00000465591 O00370 1275 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 P4HA2O15460 535 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 ATG13O75143 517 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms