RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 GPR162Q16538 588 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 DEF8Q6ZN54 512 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 MAEAQ7L5Y9 396 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 GPATCH3Q96I76 525 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 ADGRE3Q9BY15 652 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 TMEM184CQ9NVA4 438 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 TBX3O15119 743 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 TLR2O60603 784 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 RAB27AP51159 221 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 SEC23BQ15437 767 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 EPM2AIP1Q7L775 607 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 KCTD20Q7Z5Y7 419 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 MICU3Q86XE3 530 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 COL23A1Q86Y22 540 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 C16orf71Q8IYS4 520 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 NGDNQ8NEJ9 315 aaKnown RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 ZBTB45Q96K62 511 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 RTFDC1Q9BY42 306 aaPredicted RBP6.18□□□□□ -1.42
SMC4-205ENST00000465563 B3GNT5Q9BYG0 378 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 POT1Q9NUX5 634 aa6.18□□□□□ -1.42
SMC4-205ENST00000465563 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 CAPN8A6NHC0 703 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 H7C4K7 107 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 PYCARD-AS1I3L0S3 204 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 EXOC5O00471 708 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 RRP9O43818 475 aaKnown RBP6.17□□□□□ -1.42
SMC4-205ENST00000465563 RASSF9O75901 435 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 OAZ2O95190 189 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 MYBP10242 640 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 CYP19A1P11511 503 aaPredicted RBP6.17□□□□□ -1.42
SMC4-205ENST00000465563 ATF7P17544 494 aaPredicted RBP6.17□□□□□ -1.42
SMC4-205ENST00000465563 PTDSS1P48651 473 aaKnown RBP6.17□□□□□ -1.42
SMC4-205ENST00000465563 CFHR3Q02985 330 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 CFHR1Q03591 330 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 SRSF1Q07955 248 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMC4-205ENST00000465563 CC2D1BQ5T0F9 858 aaKnown RBP6.17□□□□□ -1.42
SMC4-205ENST00000465563 OVCH2Q7RTZ1 564 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 PIP4P1Q86T03 277 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 ANKRD13BQ86YJ7 626 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 CHPFQ8IZ52 775 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 WDYHV1Q96HA8 205 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 SACM1LQ9NTJ5 587 aa6.17□□□□□ -1.42
SMC4-205ENST00000465563 TRIM43BA6NCK2 446 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 CD8B2A6NJW9 211 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 CTNND1O60716 968 aaKnown RBP6.16□□□□□ -1.42
SMC4-205ENST00000465563 RFPL1O75677 317 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 HGFP14210 728 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 KLRC1P26715 233 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 THBS4P35443 961 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 GATMP50440 423 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 PGDP52209 483 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 SUMO3P55854 103 aaPredicted RBP6.16□□□□□ -1.42
SMC4-205ENST00000465563 RPS13P62277 151 aaKnown RBP6.16□□□□□ -1.42
SMC4-205ENST00000465563 LEXMQ3ZCV2 418 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 TRIM43Q96BQ3 446 aaPredicted RBP6.16□□□□□ -1.42
SMC4-205ENST00000465563 HEY2Q9UBP5 337 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 USP19O94966 1318 aa6.16□□□□□ -1.42
SMC4-205ENST00000465563 CLIC1O00299 241 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 CNOT3O75175 753 aaKnown RBP6.15□□□□□ -1.42
SMC4-205ENST00000465563 PIAS2O75928 621 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 CTSAP10619 480 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 CD19P15391 556 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 ME1P48163 572 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 ITGA8P53708 1063 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 ANAPC15P60006 121 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 ARHGEF7Q14155 803 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 NPY5RQ15761 445 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 MIDNQ504T8 468 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMC4-205ENST00000465563 C12orf76Q8N812 135 aaPredicted RBP6.15□□□□□ -1.42
SMC4-205ENST00000465563 ADAMTS15Q8TE58 950 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 MARK4Q96L34 752 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 STK31Q9BXU1 1019 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 C22orf23Q9BZE7 217 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 CDH19Q9H159 772 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 TMEM60Q9H2L4 133 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 DHX36Q9H2U1 1008 aaKnown RBP6.15□□□□□ -1.42
SMC4-205ENST00000465563 STK32BQ9NY57 414 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 CPNE7Q9UBL6 633 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 NKX1-2Q9UD57 310 aaPredicted RBP6.15□□□□□ -1.42
SMC4-205ENST00000465563 HDAC9Q9UKV0 1011 aa6.15□□□□□ -1.42
SMC4-205ENST00000465563 CNTNAP2Q9UHC6 1331 aa6.15□□□□□ -1.43
SMC4-205ENST00000465563 CFAP69A5D8W1 941 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 H3BNX3 289 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 PDGFRBP09619 1106 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 MFSD13AQ14CX5 517 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 ZNF750Q32MQ0 723 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 PIM3Q86V86 326 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 NMD3Q96D46 503 aaKnown RBP6.14□□□□□ -1.43
SMC4-205ENST00000465563 HIC2Q96JB3 615 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 DDX56Q9NY93 547 aaKnown RBP6.14□□□□□ -1.43
SMC4-205ENST00000465563 HS3ST3B1Q9Y662 390 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 SQORQ9Y6N5 450 aa6.14□□□□□ -1.43
SMC4-205ENST00000465563 hCG_2014768A0A024R1R8 64 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 A8MVJ9 347 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 ISM1B1AKI9 464 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 CRYABP02511 175 aaKnown RBP6.13□□□□□ -1.43
SMC4-205ENST00000465563 PARP1P09874 1014 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms