RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 TULP3O75386 442 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 ALDH1A2O94788 518 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 RTN3O95197 1032 aaPredicted RBP11.61□□□□□ -0.55
COL11A1-207ENST00000465209 ABL1P00519 1130 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 ENGP17813 658 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 GABRG2P18507 467 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 TNNI1P19237 187 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 ITPKAP23677 461 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 YWHAQP27348 245 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 HOXD12P35452 270 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 CASP4P49662 377 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
COL11A1-207ENST00000465209 TNNC1P63316 161 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 CLDN10P78369 228 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 GAD2Q05329 585 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 IFRD2Q12894 506 aaPredicted RBP11.61□□□□□ -0.55
COL11A1-207ENST00000465209 LMAN2Q12907 356 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 SEMA3BQ13214 749 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 ARMCX6Q7L4S7 300 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 LPCAT2Q7L5N7 544 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 FUKQ8N0W3 1084 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 TERB1Q8NA31 727 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 XXYLT1Q8NBI6 393 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 PDZD8Q8NEN9 1154 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 HMGB4Q8WW32 186 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 FBXO32Q969P5 355 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 P2RY11Q96G91 374 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 SPACA7Q96KW9 195 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 CUEDC2Q9H467 287 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 CAPN10Q9HC96 672 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 FSCN3Q9NQT6 498 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 STARD13Q9Y3M8 1113 aa11.61□□□□□ -0.55
COL11A1-207ENST00000465209 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
COL11A1-207ENST00000465209 CKAP5Q14008 2032 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 TMEM8BA6NDV4 472 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 A8MXQ7 604 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 PPP6R2O75170 966 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 BEST1O76090 585 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 VNN1O95497 513 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 CASP1P29466 404 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 ATICP31939 592 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 CYP2J2P51589 502 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 CDH8P55286 799 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 ASIC1P78348 528 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 LYSMD4Q5XG99 296 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 TMEM25Q86YD3 366 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 NELFCDQ8IXH7 590 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 ZNF513Q8N8E2 541 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-207ENST00000465209 NAT16Q8N8M0 369 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 ELMO3Q96BJ8 720 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 INTS4Q96HW7 963 aaKnown RBP11.6□□□□□ -0.55
COL11A1-207ENST00000465209 SMOQ99835 787 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 CSNK1G1Q9HCP0 422 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 DMAP1Q9NPF5 467 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-207ENST00000465209 SPHK2Q9NRA0 654 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 GMIPQ9P107 970 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 CALCOCO1Q9P1Z2 691 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 HMGXB4Q9UGU5 601 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-207ENST00000465209 PLXNB3Q9ULL4 1909 aa11.6□□□□□ -0.55
COL11A1-207ENST00000465209 ANKRD11Q6UB99 2663 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 IGHV1OR15-9A0A0B4J2B8 117 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 SPTLC2O15270 562 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 C4BPAP04003 597 aaKnown RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 CAPNS1P04632 268 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 HOXB3P14651 431 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 MAPK8P45983 427 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 UAP1L1Q3KQV9 507 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 EGFLAMQ63HQ2 1017 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 SLC41A1Q8IVJ1 513 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 PARD3BQ8TEW8 1205 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 TMEM174Q8WUU8 243 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 SYAP1Q96A49 352 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 DHX58Q96C10 678 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 SMARCD1Q96GM5 515 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 ACOX2Q99424 681 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 GABRG3Q99928 467 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 NUSAP1Q9BXS6 441 aaKnown RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 LRRC27Q9C0I9 530 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 CD93Q9NPY3 652 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 KRT82Q9NSB4 513 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 COMMD8Q9NX08 183 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 OSER1Q9NX31 292 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 NXF1Q9UBU9 619 aaKnown RBP11.59□□□□□ -0.55
COL11A1-207ENST00000465209 NEUROG3Q9Y4Z2 214 aa11.59□□□□□ -0.55
COL11A1-207ENST00000465209 FAM221BA6H8Z2 402 aa11.58□□□□□ -0.56
COL11A1-207ENST00000465209 SRRM3A6NNA2 597 aaPredicted RBP11.58□□□□□ -0.56
COL11A1-207ENST00000465209 PRRT4C9JH25 899 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms