RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PEBP4Q96S96 227 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 CCDC106Q9BWC9 280 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 WWP1Q9H0M0 922 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 RAB6BQ9NRW1 208 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 COL11A1P12107 1806 aaPredicted RBP19.19■□□□□ 0.66
HPS3-204ENST00000462030 SPAG6O75602 509 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 POLR2BP30876 1174 aaKnown RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 SP2Q02086 613 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 DSG1Q02413 1049 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 CAPSQ13938 189 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 UBAP2LQ14157 1087 aaKnown RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 NOMO1Q15155 1222 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 RAB6CQ53S08 254 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 ANGEL2Q5VTE6 544 aaKnown RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 XYLT1Q86Y38 959 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 TUBGCP5Q96RT8 1024 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 ECSITQ9BQ95 431 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 EBF4Q9BQW3 602 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 RAB6CQ9H0N0 254 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 PNPLA8Q9NP80 782 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 NDE1Q9NXR1 346 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 SIRPGQ9P1W8 387 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 PDP2Q9P2J9 529 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 KCNG1Q9UIX4 513 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 TRPC5Q9UL62 973 aaPredicted RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 KRT37O76014 449 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 TRUB2O95900 331 aaKnown RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 OATP04181 439 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 YWHAEP62258 255 aaKnown RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 C1orf146Q5VVC0 180 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 ATG16L1Q676U5 607 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 ZCCHC23Q6ZST2 131 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 CEP120Q8N960 986 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 AKT1S1Q96B36 256 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 GBP5Q96PP8 586 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 NR1H4Q96RI1 486 aaPredicted RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 TRIM56Q9BRZ2 755 aaKnown RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 ASCC2Q9H1I8 757 aaPredicted RBP19.18■□□□□ 0.66
HPS3-204ENST00000462030 POPDC2Q9HBU9 364 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
HPS3-204ENST00000462030 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 KLHL33A6NCF5 533 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 TOP3BO95985 862 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 TFAMQ00059 246 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 CDC16Q13042 620 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 TRPC3Q13507 836 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 ZNF699Q32M78 642 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 SH3PXD2AQ5TCZ1 1133 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 FKBP1CQ5VVH2 108 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 NUDCD3Q8IVD9 361 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 NSUN6Q8TEA1 469 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 KCNN1Q92952 543 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 PCMTD2Q9NV79 361 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 NXF1Q9UBU9 619 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 ZC3H7BQ9UGR2 993 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 HBS1LQ9Y450 684 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 H7C0C1 242 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 CHADO15335 359 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 CSH1P0DML2 217 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 CSH2P0DML3 217 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 STIP1P31948 543 aaKnown RBP19.17■□□□□ 0.66
HPS3-204ENST00000462030 CCNFP41002 786 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 ATP5OP48047 213 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 AP2B1P63010 937 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 C6orf163Q5TEZ5 329 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 C1orf228Q6PIY5 440 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 TRIM42Q8IWZ5 723 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 TMEM130Q8N3G9 435 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 SLC7A3Q8WY07 619 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 MTBPQ96DY7 904 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 ZNF302Q9NR11 478 aa19.17■□□□□ 0.66
HPS3-204ENST00000462030 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 CDH6P55285 790 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 RAPH1Q70E73 1250 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 LRRN4Q8WUT4 740 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 RILPQ96NA2 401 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 ZCWPW1Q9H0M4 648 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 XYLT2Q9H1B5 865 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 RSAD1Q9HA92 442 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.16■□□□□ 0.66
HPS3-204ENST00000462030 COL4A5P29400 1685 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 MAP3K6O95382 1288 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 CRABP2P29373 138 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 AP3M2P53677 418 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 DUOXA2Q1HG44 320 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 DNAL1Q4LDG9 190 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 SNRNP48Q6IEG0 339 aaKnown RBP19.16■□□□□ 0.66
HPS3-204ENST00000462030 CRLF3Q8IUI8 442 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 USP29Q9HBJ7 922 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 ZNF180Q9UJW8 692 aa19.16■□□□□ 0.66
HPS3-204ENST00000462030 MGAMO43451 1857 aa19.15■□□□□ 0.66
HPS3-204ENST00000462030 SNNO75324 88 aaPredicted RBP19.15■□□□□ 0.66
HPS3-204ENST00000462030 RTN3O95197 1032 aaPredicted RBP19.15■□□□□ 0.66
HPS3-204ENST00000462030 CAND1Q86VP6 1230 aaKnown RBP19.15■□□□□ 0.66
HPS3-204ENST00000462030 GSTCDQ8NEC7 633 aa19.15■□□□□ 0.66
HPS3-204ENST00000462030 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
HPS3-204ENST00000462030 TMEM134Q9H6X4 195 aa19.15■□□□□ 0.66
HPS3-204ENST00000462030 MAFBQ9Y5Q3 323 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms