RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ZNF276Q8N554 614 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 MAFAQ8NHW3 353 aaPredicted RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 UBE2Q2Q8WVN8 375 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 CPA5Q8WXQ8 436 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 PDLIM2Q96JY6 352 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 LPIN3Q9BQK8 851 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 ZSWIM1Q9BR11 485 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 SELENOOQ9BVL4 669 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 ISCUQ9H1K1 167 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 CRISPLD1Q9H336 500 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 ATXN3LQ9H3M9 355 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 UBE2ZQ9H832 354 aaPredicted RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 WDR6Q9NNW5 1121 aaKnown RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 GDE1Q9NZC3 331 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 STAP1Q9ULZ2 295 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 TRAV19A0A0A6YYK7 116 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 EIF3CLB5ME19 914 aaKnown RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 E5RJQ4 531 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 CCP110O43303 1012 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 BEST1O76090 585 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 NDUFA10O95299 355 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 VNN2O95498 520 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 ABL1P00519 1130 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 MYL4P12829 197 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 CHRNB2P17787 502 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 KCNA5P22460 613 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 GABRR2P28476 465 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 GBP1P32455 592 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 AVPR1AP37288 418 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 GSCP56915 257 aaPredicted RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SLC6A3Q01959 620 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 HECTD3Q5T447 861 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SNX30Q5VWJ9 437 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 DNAJC24Q6P3W2 148 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 DCUN1D2Q6PH85 259 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 KLHDC10Q6PID8 442 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 OTOP3Q7RTS5 596 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 GRASPQ7Z6J2 395 aaPredicted RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SCUBE3Q8IX30 993 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 RHOT2Q8IXI1 618 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SMRP1Q8NCR6 262 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 ZMIZ2Q8NF64 920 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SLC30A5Q8TAD4 765 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 PPM1EQ8WY54 764 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 E2F7Q96AV8 911 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 TRIM44Q96DX7 344 aaPredicted RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 EIF3CQ99613 913 aaKnown RBP11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SYT11Q9BT88 431 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 ULBP1Q9BZM6 244 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 TSGA10Q9BZW7 698 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SLITRK6Q9H5Y7 841 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 POPDC2Q9HBU9 364 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 USTQ9Y2C2 406 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 NR2E1Q9Y466 385 aa11.56□□□□□ -0.56
SMNDC1-203ENST00000460483 SCN1AP35498 2009 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 A0A087X0T9 212 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 TMCO5BA8MYB1 307 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 HHLA1C9JL84 531 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 DDX3XO00571 662 aaKnown RBP eCLIP11.55□□□□□ -0.561e-9■□□□□ 9.8
SMNDC1-203ENST00000460483 SOAT2O75908 522 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 GLP2RO95838 553 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 F9P00740 461 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 LTFP02788 710 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 TMEM253P0C7T8 217 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 FAM228BP0C875 321 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 KRT3P12035 628 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 HMGA1P17096 107 aaKnown RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 ATP5C1P36542 298 aaKnown RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 MAGEA1P43355 309 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 CACNA2D1P54289 1103 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 DAOAP59103 153 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 YWHAGP61981 247 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 COG7P83436 770 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 GFPT1Q06210 699 aaPredicted RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 KIF5AQ12840 1032 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 CBX2Q14781 532 aaPredicted RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 CCDC142Q17RM4 750 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 LEXMQ3ZCV2 418 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 ACBD5Q5T8D3 534 aaPredicted RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 FAM102AQ5T9C2 384 aaPredicted RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 SYCE2Q6PIF2 218 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 MMS22LQ6ZRQ5 1243 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 SLC26A9Q7LBE3 791 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 KIAA1328Q86T90 577 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 MCOLN2Q8IZK6 566 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 WDTC1Q8N5D0 677 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 TTC9BQ8N6N2 239 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 GPR152Q8TDT2 470 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 ZNF707Q96C28 371 aaPredicted RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 MSLNLQ96KJ4 702 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 PPP1R9BQ96SB3 815 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 CPXM1Q96SM3 734 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms