RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RGS10O43665 173 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 ITGA5P08648 1049 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 HKR1P10072 659 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 IDEP14735 1019 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 PCSK6P29122 969 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 UQCRC1P31930 480 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 HTR7P34969 479 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 CHKAP35790 457 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 HALP42357 657 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 GRK6P43250 576 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 NXPH1P58417 271 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 BLMHQ13867 455 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 PTK2BQ14289 1009 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 SPARCL1Q14515 664 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 LY6KQ17RY6 165 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.02□□□□□ -1.77
RFC4-211ENST00000460408 DEPDC1Q5TB30 811 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 FAXCQ5TGI0 409 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 ANO1Q5XXA6 986 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 ARL6IP4Q66PJ3 421 aaKnown RBP4.02□□□□□ -1.77
RFC4-211ENST00000460408 ABLIM2Q6H8Q1 611 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 LIN54Q6MZP7 749 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 MAVSQ7Z434 540 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 FAM71BQ8TC56 605 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 OSCP1Q8WVF1 389 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 Q96MF0 132 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 WDR24Q96S15 920 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 RMDN3Q96TC7 470 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 HERPUD2Q9BSE4 406 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 C17orf80Q9BSJ5 609 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 SLC25A32Q9H2D1 315 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 AGO4Q9HCK5 861 aaKnown RBP4.02□□□□□ -1.77
RFC4-211ENST00000460408 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 DNAJB11Q9UBS4 358 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 FRMD4BQ9Y2L6 1034 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 DTNAQ9Y4J8 743 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 COL15A1P39059 1388 aa4.02□□□□□ -1.77
RFC4-211ENST00000460408 MAST3O60307 1309 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 ACKR2O00590 384 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 PCDH17O14917 1159 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 PIP5K1BO14986 540 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 YY2O15391 372 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 TLR5O60602 858 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 CBFA2T3O75081 653 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 NTSR1P30989 418 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 SERPINF1P36955 418 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 PTH2RP49190 550 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 PGDP52209 483 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 BLOC1S1P78537 153 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 NSUN2Q08J23 767 aaKnown RBP eCLIP4.01□□□□□ -1.77
RFC4-211ENST00000460408 FOXO1Q12778 655 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 PTPRRQ15256 657 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 ELF2Q15723 593 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 TXNRD1Q16881 649 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 CCDC38Q502W7 563 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 ZNF362Q5T0B9 420 aaPredicted RBP4.01□□□□□ -1.77
RFC4-211ENST00000460408 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 SLC9A4Q6AI14 798 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 GGT6Q6P531 493 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 IZUMO1Q8IYV9 350 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 BOLLQ8N9W6 283 aaKnown RBP4.01□□□□□ -1.77
RFC4-211ENST00000460408 MBD3L2Q8NHZ7 208 aaPredicted RBP4.01□□□□□ -1.77
RFC4-211ENST00000460408 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 SOCS4Q8WXH5 440 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 CAVIN3Q969G5 261 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 RFKQ969G6 155 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 PGBD1Q96JS3 809 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 ZBTB45Q96K62 511 aaPredicted RBP4.01□□□□□ -1.77
RFC4-211ENST00000460408 VN1R3Q9BXE9 311 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 KLC4Q9NSK0 619 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 GRHPRQ9UBQ7 328 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 RIMKLBQ9ULI2 386 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 CA14Q9ULX7 337 aa4.01□□□□□ -1.77
RFC4-211ENST00000460408 MORC2Q9Y6X9 1032 aaPredicted RBP4.01□□□□□ -1.77
RFC4-211ENST00000460408 ARHGEF17Q96PE2 2063 aaPredicted RBP4.01□□□□□ -1.77
RFC4-211ENST00000460408 A1L4Q6 167 aa4□□□□□ -1.77
RFC4-211ENST00000460408 PROB1E7EW31 1015 aa4□□□□□ -1.77
RFC4-211ENST00000460408 SLC16A3O15427 465 aaKnown RBP4□□□□□ -1.77
RFC4-211ENST00000460408 MPPED1O15442 326 aa4□□□□□ -1.77
RFC4-211ENST00000460408 COQ9O75208 318 aa4□□□□□ -1.77
RFC4-211ENST00000460408 TNFRSF6BO95407 300 aa4□□□□□ -1.77
RFC4-211ENST00000460408 VNN1O95497 513 aa4□□□□□ -1.77
RFC4-211ENST00000460408 NTSR2O95665 410 aa4□□□□□ -1.77
RFC4-211ENST00000460408 GLP2RO95838 553 aa4□□□□□ -1.77
RFC4-211ENST00000460408 C1RP00736 705 aa4□□□□□ -1.77
RFC4-211ENST00000460408 IL6RP08887 468 aaPredicted RBP4□□□□□ -1.77
RFC4-211ENST00000460408 EPHA3P29320 983 aa4□□□□□ -1.77
RFC4-211ENST00000460408 PRKAR1BP31321 381 aa4□□□□□ -1.77
RFC4-211ENST00000460408 CXCR5P32302 372 aa4□□□□□ -1.77
RFC4-211ENST00000460408 LIPAP38571 399 aa4□□□□□ -1.77
RFC4-211ENST00000460408 FOLR3P41439 243 aa4□□□□□ -1.77
RFC4-211ENST00000460408 GATMP50440 423 aa4□□□□□ -1.77
RFC4-211ENST00000460408 CLCN2P51788 898 aa4□□□□□ -1.77
RFC4-211ENST00000460408 TIRAPP58753 221 aa4□□□□□ -1.77
RFC4-211ENST00000460408 EIF2B5Q13144 721 aaKnown RBP4□□□□□ -1.77
RFC4-211ENST00000460408 ATP1A4Q13733 1029 aa4□□□□□ -1.77
RFC4-211ENST00000460408 PDCD2Q16342 344 aaPredicted RBP4□□□□□ -1.77
RFC4-211ENST00000460408 TRIM71Q2Q1W2 868 aaKnown RBP4□□□□□ -1.77
RFC4-211ENST00000460408 TMEM95Q3KNT9 176 aa4□□□□□ -1.77
RFC4-211ENST00000460408 C4orf46Q504U0 113 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms