RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 SOAT2O75908 522 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 ABL1P00519 1130 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 F9P00740 461 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 LTFP02788 710 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 ERBB2P04626 1255 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 CFHP08603 1231 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 MYL4P12829 197 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 ABCB4P21439 1286 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 GPR15P49685 360 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 VAV2P52735 878 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 CACNA2D1P54289 1103 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 GALCP54803 685 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 ACAP1Q15027 740 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 AAK1Q2M2I8 961 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 RARS2Q5T160 578 aaKnown RBP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 HECTD3Q5T447 861 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 SDHAF4Q5VUM1 108 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 KLHDC10Q6PID8 442 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 SND1Q7KZF4 910 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 TMEM139Q8IV31 216 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 SCAMP5Q8TAC9 235 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 HLA-CQ95604 372 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 MCRS1Q96EZ8 462 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 CD207Q9UJ71 328 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 MRPS23Q9Y3D9 190 aaKnown RBP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 MYH10P35580 1976 aa12.94□□□□□ -0.34
HDAC4-206ENST00000460235 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 BTNL10A8MVZ5 291 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 GOLGA8SH3BPF8 625 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 MYO1FO00160 1098 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 TULP2O00295 520 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 PAPSS1O43252 624 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 RFPL2O75678 378 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 CYP1A2P05177 515 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 RHOP08100 348 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 GABRR2P28476 465 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 NOS2P35228 1153 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 ATP5C1P36542 298 aaKnown RBP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 NAP1L1P55209 391 aaKnown RBP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 CCZ1BP86790 482 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 CCZ1P86791 482 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 ACBD5Q5T8D3 534 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 BSPRYQ5W0U4 402 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 PLEKHA7Q6IQ23 1121 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 RAD9BQ6WBX8 426 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 FAM183BPQ6ZVS7 135 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 GPR152Q8TDT2 470 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 RFFLQ8WZ73 363 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 TMEM30AQ9NV96 361 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC4-206ENST00000460235 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 MYO7AQ13402 2215 aa12.93□□□□□ -0.34
HDAC4-206ENST00000460235 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 ZNF840PA6NDX5 716 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 DAB1O75553 588 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 RNF8O76064 485 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 SLC2A3P11169 496 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 NCAM1P13591 858 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 RRM1P23921 792 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 FSHRP23945 695 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 SDC4P31431 198 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 ARHGAP25P42331 645 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 MATKP42679 507 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 NOP2P46087 812 aaKnown RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 CDR1P51861 262 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 COG7P83436 770 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 PIGHQ14442 188 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 TCEAL1Q15170 157 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 OLFML1Q6UWY5 402 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 ZNF662Q6ZS27 426 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 Q7L0L9 218 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 GRASPQ7Z6J2 395 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 RNF10Q8N5U6 811 aaKnown RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 FEZF2Q8TBJ5 459 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 FNIP1Q8TF40 1166 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 THAP2Q9H0W7 228 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 SLITRK6Q9H5Y7 841 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 UBE2ZQ9H832 354 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 WDR6Q9NNW5 1121 aaKnown RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 TAS2R14Q9NYV8 317 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 GDE1Q9NZC3 331 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 GMIPQ9P107 970 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
HDAC4-206ENST00000460235 MYO1AQ9UBC5 1043 aa12.92□□□□□ -0.34
HDAC4-206ENST00000460235 CHORDC1Q9UHD1 332 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms