RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 LRRC10BA6NIK2 292 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 GOLGA6L19H0YKK7 550 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 ZDHHC11BP0C7U3 371 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 MBL2P11226 248 aaPredicted RBP22.89■■□□□ 1.25
SSNA1-202ENST00000459860 ATP1A3P13637 1013 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 UCHL3P15374 230 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 TKTL1P51854 596 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 IQCB1Q15051 598 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 MEA1Q16626 185 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 DDX42Q86XP3 938 aaKnown RBP eCLIP22.89■■□□□ 1.25
SSNA1-202ENST00000459860 ARHGAP18Q8N392 663 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 SECISBP2LQ93073 1101 aaKnown RBP22.89■■□□□ 1.25
SSNA1-202ENST00000459860 AJAP1Q9UKB5 411 aaPredicted RBP22.89■■□□□ 1.25
SSNA1-202ENST00000459860 USP3Q9Y6I4 520 aa22.89■■□□□ 1.25
SSNA1-202ENST00000459860 VPS13AQ96RL7 3174 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 KRBA1A5PL33 1030 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 STK25O00506 426 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 OLFM2O95897 454 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 CALCAP01258 141 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 BPIFB4P59827 614 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 SLC7A9P82251 487 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 USP4Q13107 963 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 MTF1Q14872 753 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 DRAP1Q14919 205 aaPredicted RBP22.88■■□□□ 1.25
SSNA1-202ENST00000459860 SYCP1Q15431 976 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 MLF2Q15773 248 aaPredicted RBP22.88■■□□□ 1.25
SSNA1-202ENST00000459860 RAB41Q5JT25 222 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 TADA2BQ86TJ2 420 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 NEK11Q8NG66 645 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 SH3RF2Q8TEC5 729 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 ZNF606Q8WXB4 792 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 ZSWIM1Q9BR11 485 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 CBX8Q9HC52 389 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 TRPV5Q9NQA5 729 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 FAM207AQ9NSI2 230 aaPredicted RBP22.88■■□□□ 1.25
SSNA1-202ENST00000459860 NAGPAQ9UK23 515 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 CPQQ9Y646 472 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 COL4A2P08572 1712 aa22.88■■□□□ 1.25
SSNA1-202ENST00000459860 TULP2O00295 520 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 TLR5O60602 858 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 ZBED1O96006 694 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 PRKCQQ04759 706 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 ADIGQ0VDE8 80 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 PKDCCQ504Y2 493 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 SLC44A4Q53GD3 710 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 KCTD13Q8WZ19 329 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 CDK5RAP1Q96SZ6 601 aaKnown RBP22.87■■□□□ 1.25
SSNA1-202ENST00000459860 CCSER2Q9H7U1 834 aa22.87■■□□□ 1.25
SSNA1-202ENST00000459860 A0A1W2PQH9 124 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 FOXN3O00409 490 aaPredicted RBP22.86■■□□□ 1.25
SSNA1-202ENST00000459860 COCHO43405 550 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 SERPINC1P01008 464 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 RALAP11233 206 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 TCF3P15923 654 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 ZNF77Q15935 545 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 DPY19L2P1Q6NXN4 242 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 FAM71AQ8IYT1 594 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 DTWD2Q8NBA8 298 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 SLC35F5Q8WV83 523 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 LRRC3BQ96PB8 259 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 SPAG5Q96R06 1193 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 ERGIC2Q96RQ1 377 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 NAA15Q9BXJ9 866 aaKnown RBP22.86■■□□□ 1.25
SSNA1-202ENST00000459860 STK33Q9BYT3 514 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 ULBP1Q9BZM6 244 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 RNF38Q9H0F5 515 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 GANQ9H2C0 597 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 SMPD4Q9NXE4 827 aa22.86■■□□□ 1.25
SSNA1-202ENST00000459860 LEFTY2O00292 366 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 RARGP13631 454 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 LCP1P13796 627 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 ATP5C1P36542 298 aaKnown RBP22.85■■□□□ 1.25
SSNA1-202ENST00000459860 IFNAR2P48551 515 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 RGS7P49802 495 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 KLK7P49862 253 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 POLR2FP61218 127 aaKnown RBP22.85■■□□□ 1.25
SSNA1-202ENST00000459860 GOLGA8FQ08AF8 430 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 GOLGA8DPQ0D2H9 430 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 PDGFRLQ15198 375 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 TPRG1Q6ZUI0 275 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 APTXQ7Z2E3 356 aaKnown RBP22.85■■□□□ 1.25
SSNA1-202ENST00000459860 LUZP1Q86V48 1076 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 ZFYVE19Q96K21 471 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 HSFY1Q96LI6 401 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 PDCL3Q9H2J4 239 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 ACP6Q9NPH0 428 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 CYLDQ9NQC7 956 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 CNGB3Q9NQW8 809 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 HEBP1Q9NRV9 189 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 CLIC5Q9NZA1 410 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 SIK3Q9Y2K2 1263 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 CEP83Q9Y592 693 aa22.85■■□□□ 1.25
SSNA1-202ENST00000459860 F8VZ95 297 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 PNMA6AP0CW24 399 aaPredicted RBP22.84■■□□□ 1.25
SSNA1-202ENST00000459860 KRT9P35527 623 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 ACADSBP45954 432 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 KPNA1P52294 538 aaPredicted RBP22.84■■□□□ 1.25
SSNA1-202ENST00000459860 YWHAGP61981 247 aaKnown RBP eCLIP22.84■■□□□ 1.25
SSNA1-202ENST00000459860 ANGPT1Q15389 498 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 PM20D1Q6GTS8 502 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms