RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 EFCAB14O75071 495 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 CELF2O95319 508 aaKnown RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 PECAM1P16284 738 aaPredicted RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 ZNF23P17027 643 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 NPTX2P47972 431 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 UNC45BQ8IWX7 931 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 B4GALNT2Q8NHY0 566 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 SLC7A14Q8TBB6 771 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 GDPD5Q8WTR4 605 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 LATS2Q9NRM7 1088 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 CD274Q9NZQ7 290 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 ATXN2Q99700 1313 aaKnown RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 SAC3D1A6NKF1 404 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 ZNF839A8K0R7 811 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 E9PBE3 544 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 KLHL41O60662 606 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 SOAT2O75908 522 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 NUDT17P0C025 328 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 RGS4P49798 205 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 RPL10AP62906 217 aaKnown RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 CHRNB3Q05901 458 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 CYP24A1Q07973 514 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
SEC16A-207ENST00000453963 EFCAB12Q6NXP0 572 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 HORMAD1Q86X24 394 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 NRDE2Q9H7Z3 1164 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
SEC16A-207ENST00000453963 A0A0U1RQJ8 604 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 GOLGA8TH3BQL2 631 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 TADA2AO75478 443 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 SUPT7LO94864 414 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 RAP1GDS1P52306 607 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 DEPDC1Q5TB30 811 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 LPCAT2Q7L5N7 544 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 ERO1BQ86YB8 467 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 DNAJC18Q9H819 358 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 TCF7L2Q9NQB0 619 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 NCKIPSDQ9NZQ3 722 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 RPL26L1Q9UNX3 145 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 PRPF4O43172 522 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 PSMG1O95456 288 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 DDR1Q08345 913 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 MGAT5Q09328 741 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 CCDC15Q0P6D6 951 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 GLB1LQ6UWU2 654 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 ZCCHC9Q8N567 271 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 TUBGCP3Q96CW5 907 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 RTFDC1Q9BY42 306 aaPredicted RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 UBE2OQ9C0C9 1292 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 MTIF3Q9H2K0 278 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 EPS8L2Q9H6S3 715 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 DRD4P21917 467 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 HNRNPH3P31942 346 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 PTPN7P35236 360 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 CXCL9Q07325 125 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 PPIDQ08752 370 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 AUHQ13825 339 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 RRP1BQ14684 758 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 DGKDQ16760 1214 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 MPP4Q96JB8 637 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 GPRC5CQ9NQ84 441 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 USP18Q9UMW8 372 aa12.42□□□□□ -0.42
SEC16A-207ENST00000453963 RUVBL2Q9Y230 463 aaKnown RBP12.42□□□□□ -0.42
SEC16A-207ENST00000453963 FAM200BP0CF97 657 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 SOX11P35716 441 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 ELK3P41970 407 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 GEMP55040 296 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 BACE1P56817 501 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 ST8SIA6P61647 398 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 SV2CQ496J9 727 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 ZNF398Q8TD17 642 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 PRCCQ92733 491 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-207ENST00000453963 SYBUQ9NX95 663 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 BTBD7Q9P203 1132 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 MROH7Q68CQ1 1323 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 OCM2P0CE71 109 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-207ENST00000453963 NAMPTP43490 491 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 CASP7P55210 303 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 GCNT1Q02742 428 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 CSTF3Q12996 717 aaKnown RBP12.41□□□□□ -0.42
SEC16A-207ENST00000453963 GTF2H3Q13889 308 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 TDRD5Q8NAT2 981 aaKnown RBP12.41□□□□□ -0.42
SEC16A-207ENST00000453963 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
SEC16A-207ENST00000453963 KCNK4Q9NYG8 393 aa12.41□□□□□ -0.42
SEC16A-207ENST00000453963 PCYOX1Q9UHG3 505 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms