RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 SNX30Q5VWJ9 437 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 PSAPL1Q6NUJ1 521 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 RHBDF2Q6PJF5 856 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 UNC93AQ86WB7 457 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 PDZD8Q8NEN9 1154 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 WHAMMQ8TF30 809 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 GAB3Q8WWW8 586 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 OVCA2Q8WZ82 227 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 WBP2Q969T9 261 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 MMRN2Q9H8L6 949 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 CSNK1G1Q9HCP0 422 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 KRT82Q9NSB4 513 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 FAM49BQ9NUQ9 324 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 GMIPQ9P107 970 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 FRYQ5TBA9 3013 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 EML5Q05BV3 1969 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 LAMA1P25391 3075 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 ATP8B3O60423 1300 aa17.4■□□□□ 0.38
RPUSD3-209ENST00000451405 CEP295Q9C0D2 2601 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 EPN2O95208 641 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 ZDHHC11BP0C7U3 371 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 ADORA2BP29275 332 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 INTS8Q75QN2 995 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 SFTPA1Q8IWL2 248 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 FMR1NBQ8N0W7 255 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 HHIPQ96QV1 700 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 SDK1Q7Z5N4 2213 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 MYH10P35580 1976 aa17.39■□□□□ 0.37
RPUSD3-209ENST00000451405 KIAA1549LQ6ZVL6 1849 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 CCDC163A0A0D9SF12 145 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 HHLA1C9JL84 531 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 KRT13P13646 458 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 INCA1Q0VD86 236 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 HECTD3Q5T447 861 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 SYT13Q7L8C5 426 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 GPRIN1Q7Z2K8 1008 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 CAMKK1Q8N5S9 505 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 SEMA4DQ92854 862 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 EXOC4Q96A65 974 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 HNRNPABQ99729 332 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 SMOC1Q9H4F8 434 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 VPS45Q9NRW7 570 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 PCDHGA5Q9Y5G8 931 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 RALGAPA1Q6GYQ0 2036 aa17.38■□□□□ 0.37
RPUSD3-209ENST00000451405 TBX18O95935 607 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 CD58P19256 250 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 PRCPP42785 496 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 NOVA1P51513 510 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 SEC13P55735 322 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 FOXC1Q12948 553 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 DMC1Q14565 340 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 C2orf27AQ580R0 203 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 CLEC20AQ6ZU45 233 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 C12orf40Q86WS4 652 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 USP33Q8TEY7 942 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 ERCC4Q92889 916 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 CYFIP2Q96F07 1278 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 CYP3A43Q9HB55 503 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
RPUSD3-209ENST00000451405 E2F8A0AVK6 867 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 SLC9A3R1O14745 358 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 MPLP40238 635 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 ENPEPQ07075 957 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 EDRF1Q3B7T1 1238 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 LY6G5CQ5SRR4 150 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 EMC10Q5UCC4 262 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 DDX42Q86XP3 938 aaKnown RBP eCLIP17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 KDF1Q8NAX2 398 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 JAKMIP2Q96AA8 810 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 NT5C1AQ9BXI3 368 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 OSER1Q9NX31 292 aa17.36■□□□□ 0.37
RPUSD3-209ENST00000451405 DCLK1O15075 740 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 CILPO75339 1184 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 FAM200BP0CF97 657 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 IRF1P10914 325 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 CHRM1P11229 460 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 TUBP50607 506 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 ZNF394Q53GI3 561 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 PLA2G2CQ5R387 149 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 PPP1R26Q5T8A7 1209 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 DAB2IPQ5VWQ8 1189 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 KRT39Q6A163 491 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 BBS7Q8IWZ6 715 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 CCDC33Q8N5R6 958 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 TATDN2Q93075 761 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 PNKPQ96T60 521 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 IMPG2Q9BZV3 1241 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 NIF3L1Q9GZT8 377 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 FBXO44Q9H4M3 255 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 NMUR1Q9HB89 426 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 TBC1D14Q9P2M4 693 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 EBF1Q9UH73 591 aa17.35■□□□□ 0.37
RPUSD3-209ENST00000451405 A0A0A0MRY4 1105 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms