RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 LIN28AQ9H9Z2 209 aaKnown RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 USP18Q9UMW8 372 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 MROH7Q68CQ1 1323 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 MRC1P22897 1456 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ANKRD12Q6UB98 2062 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 SAC3D1A6NKF1 404 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 A8MXQ7 604 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 H0YCG3 227 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 FKBP6O75344 327 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 CCNB1P14635 433 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 JAK3P52333 1124 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 PDK1Q15118 436 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 SPDYAQ5MJ70 313 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 SLC10A5Q5PT55 438 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 HYIQ5T013 277 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 MYLK4Q86YV6 388 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ALLCQ8N6M5 410 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 PLEKHO2Q8TD55 490 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 BCL9O00512 1426 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 NFAT5O94916 1531 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 NR3C2P08235 984 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 P4HA1P13674 534 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 PSMC3P17980 439 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 GPC3P51654 580 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 MSS51Q4VC12 460 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 CIAPIN1Q6FI81 312 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 CLVS1Q8IUQ0 354 aaPredicted RBP12.83□□□□□ -0.35
UBE3B-204ENST00000449510 STKLD1Q8NE28 680 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 CCDC134Q9H6E4 229 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 SLC17A6Q9P2U8 582 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 ACTL7BQ9Y614 415 aa12.83□□□□□ -0.35
UBE3B-204ENST00000449510 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 MIPP30301 263 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 DLG1Q12959 904 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 Q3C1V9 767 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 RSBN1LQ6PCB5 846 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 AMIGO2Q86SJ2 522 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 RNF169Q8NCN4 708 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 HELQQ8TDG4 1101 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 TMEM79Q9BSE2 394 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 WDR55Q9H6Y2 383 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 USP21Q9UK80 565 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 TSC22D4Q9Y3Q8 395 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 WDR27A2RRH5 827 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 LIN7AO14910 233 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 T-ENOLP0DO92 83 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 CHRNA5P30532 468 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 CCR3P51677 355 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 LBRQ14739 615 aaKnown RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 CDCA2Q69YH5 1023 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-204ENST00000449510 JOSD2Q8TAC2 188 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 TRAPPC9Q96Q05 1148 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 ACSS3Q9H6R3 686 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 KCND2Q9NZV8 630 aa12.83□□□□□ -0.36
UBE3B-204ENST00000449510 DGAT1O75907 488 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 WFS1O76024 890 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 TPH1P17752 444 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 MAP4P27816 1152 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ALDH1A3P47895 512 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 CHN2P52757 468 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 STX1BP61266 288 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ZBTB41Q5SVQ8 909 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 KATNAL2Q8IYT4 538 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ARL10Q8N8L6 244 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 SNX31Q8N9S9 440 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 FAM192AQ9GZU8 254 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 JPH1Q9HDC5 661 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 PAK5Q9P286 719 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 POLIQ9UNA4 740 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 DISP2A7MBM2 1401 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 XPOTO43592 962 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 EXTL3O43909 919 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ZNF189O75820 626 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 TMCC1O94876 653 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 CCND2P30279 289 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ACVR2BQ13705 512 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 USP10Q14694 798 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ASRGL1Q7L266 308 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 SPATA6LQ8N4H0 392 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 CPT1BQ92523 772 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms