RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 GNA13Q14344 377 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 CLEC16AQ2KHT3 1053 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 PAN2Q504Q3 1202 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 SLC30A5Q8TAD4 765 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 MTMR12Q9C0I1 747 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 GLRA3O75311 464 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 PGK2P07205 417 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 POLR2EP19388 210 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 CLCN3P51790 818 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 ZNF211Q13398 564 aaPredicted RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 C18orf25Q96B23 403 aaPredicted RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 ABCC13Q9NSE7 274 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 GJB4Q9NTQ9 266 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 FBXO28Q9NVF7 368 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 SPG21Q9NZD8 308 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 WHRNQ9P202 907 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 FRMPD4Q14CM0 1322 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 MYL4P12829 197 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 MSH3P20585 1137 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 QRFPRQ96P65 431 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 RAD21L1Q9H4I0 556 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 DDX43Q9NXZ2 648 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 CNTNAP2Q9UHC6 1331 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 PIK3CDO00329 1044 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 RAMP2O60895 175 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 SRP72O76094 671 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 MTA2O94776 668 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 HMGCRP04035 888 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 FAM46CQ5VWP2 391 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 GLMNQ92990 594 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 POP5Q969H6 163 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 C2orf49Q9BVC5 232 aaPredicted RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 DDX47Q9H0S4 455 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 C1QTNF3-AMACRE9PGA6 284 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 HPGDP15428 266 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 ARMC2Q8NEN0 867 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 UBE2E3Q969T4 207 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 OLFM3Q96PB7 478 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 KAT6AQ92794 2004 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 NDUFS2O75306 463 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 VTNP04004 478 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 DARSP14868 501 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 PPP2R1BP30154 601 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 FAM171A1Q5VUB5 890 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 C3orf62Q6ZUJ4 267 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 USP45Q70EL2 814 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 UBA3Q8TBC4 463 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 AHCYL2Q96HN2 611 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 RNF112Q9ULX5 631 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 MEFVO15553 781 aaPredicted RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 CSH1P0DML2 217 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 CSH2P0DML3 217 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 UQCRBP14927 111 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ZC2HC1CQ53FD0 456 aaPredicted RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 CATSPERGQ6ZRH7 1159 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 CIPCQ9C0C6 399 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 SNUPNO95149 360 aaKnown RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 OR56A5P0C7T3 313 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 BRD2P25440 801 aaKnown RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 SULT2A1Q06520 285 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 PTK7Q13308 1070 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 PLCL1Q15111 1095 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 FAM133BQ5BKY9 247 aaKnown RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 SUSD6Q92537 303 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ARL2BPQ9Y2Y0 163 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DERAQ9Y315 318 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 A0A1B0GW55 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 A0A1W2PQ67 120 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 GLP2RO95838 553 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4L2P0CJ85 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4L3P0CJ86 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4L4P0CJ87 422 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4L5P0CJ88 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4L6P0CJ89 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4L7P0CJ90 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ZNF7P17097 686 aaPredicted RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 TRPC1P48995 793 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 STK4Q13043 487 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 PPP1R15BQ5SWA1 713 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 HEXDCQ8WVB3 486 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ASAH2Q9NR71 780 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DUX4Q9UBX2 424 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 USP18Q9UMW8 372 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 TMEM114B3SHH9 223 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 MZF1P28698 734 aaPredicted RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 ATN1P54259 1190 aaPredicted RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 MRPS6P82932 125 aaKnown RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 GCNT1Q02742 428 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 PPIGQ13427 754 aaKnown RBP eCLIP8.82□□□□□ -13e-7■■■■■ 28.4
PTPN3-204ENST00000446349 MARC1Q5VT66 337 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 FAM47EQ6ZV65 393 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 FDXACB1Q9BRP7 624 aaPredicted RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 KBTBD4Q9NVX7 518 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 KLK14Q9P0G3 267 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DTNBO60941 627 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 PRLRP16471 622 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 CELF3Q5SZQ8 465 aaKnown RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 ACOT1Q86TX2 421 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 OSMRQ99650 979 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms