RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TLX3O43711 291 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CBFA2T3O75081 653 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 RECQL4O94761 1208 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ATXN1LP0C7T5 689 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 FDPSP14324 419 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ARSAP15289 507 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 GNSP15586 552 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CYP3A7P24462 503 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 TNFRSF8P28908 595 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PDIA3P30101 505 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CDC27P30260 824 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ADSSP30520 456 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 YWHABP31946 246 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 GJA4P35212 333 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 AVPR1AP37288 418 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CDR1P51861 262 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CLNS1AP54105 237 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CYP4F8P98187 520 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF33AQ06730 810 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PPP2R5CQ13362 524 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CAPSQ13938 189 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 TRIM14Q14142 442 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 LY6DQ14210 128 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PDGFRLQ15198 375 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CRY1Q16526 586 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 FILIP1LQ4L180 1135 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 LACTB2Q53H82 288 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CEP85LQ5SZL2 805 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 BROXQ5VW32 411 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 MOXD1Q6UVY6 613 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 KDM7AQ6ZMT4 941 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF572Q7Z3I7 529 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ITIH5Q86UX2 942 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CD302Q8IX05 232 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 C4orf19Q8IY42 314 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CCDC33Q8N5R6 958 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF579Q8NAF0 562 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 RHBDD1Q8TEB9 315 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 HMGB4Q8WW32 186 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 C8orf76Q96K31 380 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 FAM83CQ9BQN1 747 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 LXNQ9BS40 222 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 SELENOOQ9BVL4 669 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ZDHHC5Q9C0B5 715 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 SEMA4CQ9C0C4 833 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 HAUS4Q9H6D7 363 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 SLC40A1Q9NP59 571 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 LZTFL1Q9NQ48 299 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 XPNPEP1Q9NQW7 623 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 VAV3Q9UKW4 847 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 MMP17Q9ULZ9 603 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 NUB1Q9Y5A7 615 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF638Q14966 1978 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PTPRDP23468 1912 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 PLXND1Q9Y4D7 1925 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 COL5A1P20908 1838 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 DENND4CQ5VZ89 1909 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 EML1O00423 815 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 PES1O00541 588 aaKnown RBP6.86□□□□□ -1.31
HDAC6-210ENST00000441703 LIN7AO14910 233 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-210ENST00000441703 N4BP3O15049 544 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 MFAP3LO75121 409 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 GJB3O75712 270 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 TDP2O95551 362 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 PAX7P23759 505 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 WEE1P30291 646 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 CDC25CP30307 473 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 HNF1BP35680 557 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 PRPHP41219 470 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 IFNAR2P48551 515 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 AKAP17AQ02040 695 aaKnown RBP6.86□□□□□ -1.31
HDAC6-210ENST00000441703 GRIK2Q13002 908 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 NR1H3Q13133 447 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 MORC3Q14149 939 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 MTF1Q14872 753 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 TAF12Q16514 161 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 GLRA4Q5JXX5 417 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 C6orf132Q5T0Z8 1188 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 SYCP2LQ5T4T6 812 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 AP1ARQ63HQ0 302 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 NAIF1Q69YI7 327 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-210ENST00000441703 EMBQ6PCB8 327 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 PPP4R3CPQ6ZMV5 832 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 RNF19BQ6ZMZ0 732 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 OTUD6AQ7L8S5 288 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 APTXQ7Z2E3 356 aaKnown RBP6.86□□□□□ -1.31
HDAC6-210ENST00000441703 FRMD1Q8N878 549 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 KRI1Q8N9T8 703 aaKnown RBP6.86□□□□□ -1.31
HDAC6-210ENST00000441703 EHBP1Q8NDI1 1231 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 TTC16Q8NEE8 873 aa6.86□□□□□ -1.31
HDAC6-210ENST00000441703 APPL2Q8NEU8 664 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms