RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SLC15A3Q8IY34 581 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 HACE1Q8IYU2 909 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 PDIK1LQ8N165 341 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 PHTF2Q8N3S3 785 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF276Q8N554 614 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 TTC13Q8NBP0 860 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 BHMTQ93088 406 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 APOPT1Q96IL0 206 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MARK4Q96L34 752 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 WRNIP1Q96S55 665 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 UNC45AQ9H3U1 944 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MTMR4Q9NYA4 1195 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 HSPBP1Q9NZL4 362 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 SLC17A6Q9P2U8 582 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 SLC24A2Q9UI40 661 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 CDH22Q9UJ99 828 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MAGED2Q9UNF1 606 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-214ENST00000441542 APOBEC2Q9Y235 224 aaKnown RBP7.81□□□□□ -1.16
HDAC9-214ENST00000441542 EFR3BQ9Y2G0 817 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 TELO2Q9Y4R8 837 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 STX16-NPEPL1H3BU86 382 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 FBP2O00757 339 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 TMEM63AO94886 807 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF132P52740 706 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 RPS6P62753 249 aaKnown RBP7.81□□□□□ -1.16
HDAC9-214ENST00000441542 CENPCQ03188 943 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 EN1Q05925 392 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF543Q08ER8 600 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ITGA9Q13797 1035 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 SEPT6Q14141 434 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 KLHL38Q2WGJ6 581 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 STXBP4Q6ZWJ1 553 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MCOLN2Q8IZK6 566 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 DCAKDQ8WVC6 231 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 TCHPQ9BT92 498 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 NDEL1Q9GZM8 345 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MUC3BQ9H195 1237 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 NDUFA13Q9P0J0 144 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 RSL24D1Q9UHA3 163 aaKnown RBP7.81□□□□□ -1.16
HDAC9-214ENST00000441542 CIDEBQ9UHD4 219 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 COQ6Q9Y2Z9 468 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 DYTNA2CJ06 578 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 HTR3EA5X5Y0 456 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CXorf49A8MYA2 514 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GIPC1O14908 333 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TM9SF1O15321 606 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ONECUT3O60422 494 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PEX3P56589 373 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SOX10P56693 466 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GPSM2P81274 684 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ASPRV1Q53RT3 343 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RNASEH2BQ5TBB1 312 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 NXNQ6DKJ4 435 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 FAM71AQ8IYT1 594 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 MYO1HQ8N1T3 1032 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PQLC1Q8N2U9 271 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TSPAN14Q8NG11 270 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ACTL9Q8TC94 416 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 LZICQ8WZA0 190 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SLC35B4Q969S0 331 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 XAB2Q9HCS7 855 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 EBF1Q9UH73 591 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 VPS51Q9UID3 782 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 STRIP2Q9ULQ0 834 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 FZD1Q9UP38 647 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 WDR37Q9Y2I8 494 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CAMTA1Q9Y6Y1 1673 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TCRBV9S1A1TA0A576 114 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CAPN14A8MX76 684 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GAS7O60861 476 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PROSCO94903 275 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TNFAIP8O95379 198 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ZBTB11O95625 1053 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GZMAP12544 262 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GAP43P17677 238 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CDH2P19022 906 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RCVRNP35243 200 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CD97P48960 835 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CLCN2P51788 898 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 STAT2P52630 851 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GSTM4Q03013 218 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RELAQ04206 551 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CLEC16AQ2KHT3 1053 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 HYIQ5T013 277 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF362Q5T0B9 420 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RARS2Q5T160 578 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 LIN9Q5TKA1 542 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ATG16L1Q676U5 607 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 POTEHQ6S545 545 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 FRMD7Q6ZUT3 714 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 DPH6Q7L8W6 267 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SAPCD2Q86UD0 394 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF410Q86VK4 478 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 NUP93Q8N1F7 819 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 XXYLT1Q8NBI6 393 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 DIS3LQ8TF46 1054 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CASP10Q92851 521 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 EME1Q96AY2 570 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 MCEEQ96PE7 176 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 WDR83Q9BRX9 315 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms