RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PITPNBP48739 271 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 SMARCB1Q12824 385 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 SGCAQ16586 387 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 KCTD21Q4G0X4 260 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 ATAT1Q5SQI0 421 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 CATSPERGQ6ZRH7 1159 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 VPS36Q86VN1 386 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 PPM1KQ8N3J5 372 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF527Q8NB42 609 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 RPRD1AQ96P16 312 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-206ENST00000441438 FAM83CQ9BQN1 747 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 SPXQ9BT56 116 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 LRRC19Q9H756 370 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 LARSQ9P2J5 1176 aaKnown RBP10.99□□□□□ -0.65
SYNE2-206ENST00000441438 ARHGAP26Q9UNA1 814 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 PIN4Q9Y237 131 aaKnown RBP10.99□□□□□ -0.65
SYNE2-206ENST00000441438 H0YCG3 227 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 ANXA1P04083 346 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 PRG2P13727 222 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 TKTP29401 623 aaKnown RBP10.98□□□□□ -0.65
SYNE2-206ENST00000441438 HOXC9P31274 260 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 CIITAP33076 1130 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF460Q14592 562 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 TDRD12Q587J7 1177 aaKnown RBP10.98□□□□□ -0.65
SYNE2-206ENST00000441438 DEFB132Q7Z7B7 95 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 ADAM19Q9H013 955 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 C5AR2Q9P296 337 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 SLC13A4Q9UKG4 626 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 TLK1Q9UKI8 766 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 F8W8V4 182 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 GUCY1B2O75343 617 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 ASNSP08243 561 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 EIF2S2P20042 333 aaKnown RBP10.98□□□□□ -0.65
SYNE2-206ENST00000441438 CCNA2P20248 432 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 TXLNAP40222 546 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 MAPK10P53779 464 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 ERVK-21P61565 698 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 SPCS2Q15005 226 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 YOD1Q5VVQ6 348 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-206ENST00000441438 OVCH2Q7RTZ1 564 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 OSCP1Q8WVF1 389 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 RAB7BQ96AH8 199 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 UCKL1Q9NWZ5 548 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 KLHL18O94889 574 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 PRAMEF12O95522 483 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 STAT5AP42229 794 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 GIPRP48546 466 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 CASP6P55212 293 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 MAP3K7CLP57077 242 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 DMC1Q14565 340 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 NFIL3Q16649 462 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 CLVS2Q5SYC1 327 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 TOM1L2Q6ZVM7 507 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 SLC51BQ86UW2 128 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 GJD3Q8N144 294 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 TCAIMQ8N3R3 496 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 SPACA9Q96E40 222 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-206ENST00000441438 CDC6Q99741 560 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 POLIQ9UNA4 740 aa10.98□□□□□ -0.65
SYNE2-206ENST00000441438 UBR3Q6ZT12 1888 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SH3D21A4FU49 640 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 GOLGA8RI6L899 631 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 DNAJC8O75937 253 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ANXA6P08133 673 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ADRA1BP35368 520 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ME1P48163 572 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 RNF144AP50876 292 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ARL4CP56559 192 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 GTF2IP78347 998 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 CCINQ13939 588 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 GIT2Q14161 759 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 CEP85Q6P2H3 762 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 KLHDC10Q6PID8 442 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF852Q6ZMS4 543 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 HDXQ7Z353 690 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 KISS1RQ969F8 398 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 NSUN4Q96CB9 384 aaKnown RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SPDL1Q96EA4 605 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SELENOSQ9BQE4 189 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SPATA9Q9BWV2 254 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 EHD4Q9H223 541 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 KIF17Q9P2E2 1029 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF148Q9UQR1 794 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 TTC26A0AVF1 554 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 DAPK3O43293 454 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGA12O60330 932 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 TXNP10599 105 aaKnown RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 CORO7P57737 925 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SCRN1Q12765 414 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 DUSP4Q13115 394 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SIGIRRQ6IA17 410 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 CCNYL1Q8N7R7 359 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 ENKURQ8TC29 256 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms