RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 LINC00271P0C7V0 271 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 CTAGE8P0CG41 777 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 DESP17661 470 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 SDC4P31431 198 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 PCK1P35558 622 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 FLT3P36888 993 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 PTPN9P43378 593 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 ARPP19P56211 112 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TAS2R40P59535 323 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TUBB4BP68371 445 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TFF2Q03403 129 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 CLUL1Q15846 466 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TRNP1Q6NT89 227 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 GPRIN1Q7Z2K8 1008 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 ZNF572Q7Z3I7 529 aaPredicted RBP12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 CTAGE6Q86UF2 777 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 CTAGE4Q8IX94 777 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 ALG3Q92685 438 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 DDX23Q9BUQ8 820 aaKnown RBP12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 CDY1Q9Y6F8 540 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 PDE2AO00408 941 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 LRCH4O75427 683 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 DAB1O75553 588 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 FGF18O76093 207 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 URODP06132 367 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 HAPLN1P10915 354 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 OR1D2P34982 312 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 NOS2P35228 1153 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 MATKP42679 507 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 MARCKSL1P49006 195 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 RABGGTBP53611 331 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 ITIH3Q06033 890 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 DCAF12L1Q5VU92 463 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 KATNAL2Q8IYT4 538 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 NUP93Q8N1F7 819 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 ARFGAP1Q8N6T3 406 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 NDRG1Q92597 394 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 MS4A14Q96JA4 679 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 PGLYRP2Q96PD5 576 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 PBX4Q9BYU1 374 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 POPDC2Q9HBU9 364 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 EFCAB8A8MWE9 144 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 C2CD2LO14523 706 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 ADAM12O43184 909 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 VNN2O95498 520 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 KRT7P08729 469 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 USP17L7P0C7H9 530 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 PYGMP11217 842 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 BMP1P13497 986 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 KCNQ1P51787 676 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 RPL10AP62906 217 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 ROR1Q01973 937 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 DAB2IPQ5VWQ8 1189 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 BEND5Q7L4P6 421 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 DEFB106AQ8N104 65 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 VPS52Q8N1B4 723 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 EXD1Q8NHP7 514 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 CENPIQ92674 756 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 SPATA17Q96L03 361 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 CEP295NLQ96MC4 621 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 CFAP57Q96MR6 1250 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 NAP1L3Q99457 506 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 TRIM62Q9BVG3 475 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 MRPL17Q9NRX2 175 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 DDX56Q9NY93 547 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 IL37Q9NZH6 218 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 FNIP2Q9P278 1114 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 HSFX1Q9UBD0 423 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-206ENST00000438763 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
HLA-DOB-206ENST00000438763 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
HLA-DOB-206ENST00000438763 WDR27A2RRH5 827 aa12.93□□□□□ -0.34
HLA-DOB-206ENST00000438763 FAM86C2PA6NEL3 165 aa12.93□□□□□ -0.34
HLA-DOB-206ENST00000438763 YJEFN3A6XGL0 299 aa12.93□□□□□ -0.34
HLA-DOB-206ENST00000438763 E7ENQ6 273 aa12.93□□□□□ -0.34
HLA-DOB-206ENST00000438763 CTIFO43310 598 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms